Job Description P10443 Confidence 96.12% Date Thu Jan 5 11:32:19 GMT 2012 Rank 54 Aligned Residues 76 % Identity 18% Template c1ynxA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:replication factor-a protein 1; PDBTitle: solution structure of dna binding domain a (dbd-a) of2 s.cerevisiae replication protein a (rpa) Resolution UNK

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		977	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.		.	.	.	.	.	.	.	.	1010	.	.		.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.
Predicted Secondary structure																											.												.
Query SS confidence																											.												.
Query Sequence		V	G	G	V	R	L	K	D	M	H	P	T	E	R	G	K	V	I	T	A	A	G	L	V	V	.	A	A	R	V	M	V	T	K	R	G	N	.	R	I	G	I	C	T	L	D	D	R	S	G	R	L	E	V	M	L	F	T	D	A	L	D	K	Y	Q	Q	L	L	E	K	D	R	I	L	I	V	S	G
Query Conservation																											.												.
Alig confidence																											.												.
Template Conservation
Template Sequence		R	P	I	F	A	I	E	Q	L	S	P	Y	Q	N	V	W	T	I	K	A	R	V	S	Y	K	G	E	I	K	T	W	H	N	Q	R	G	D	G	K	L	F	N	V	N	F	L	D	T	S	G	E	I	R	A	T	A	F	N	D	F	A	T	K	F	N	E	I	L	Q	E	G	K	V	Y	Y	V	S	K
Template Known Secondary structure				B			G	G	G			T	T	T																					S	S													T	T																			S		S	S	S						S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions