Job Description P10443 Confidence 78.98% Date Thu Jan 5 11:32:19 GMT 2012 Rank 94 Aligned Residues 95 % Identity 19% Template c1wxpA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:tho complex subunit 1; PDBTitle: solution structure of the death domain of nuclear matrix2 protein p84 Resolution UNK

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		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	P	D	F	D	V	D	F	C	M	E	K	R	D	Q	V	I	E	H	V	A	D	M	Y	G	R	D	A	V	S	Q	I	I	T	F	G	T	M	A	A	K	A	V	I	R	D	V	G	R	V	L	G	H	P	Y	G	F	V	D	R	I	S	K	L	I	P	P	D	P	G	M	T	L	A	K	A	F	E	A
Query Conservation
Alig confidence															.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation															.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		S	G	P	D	V	R	R	D	K	P	V	T	G	.	.	E	Q	I	E	V	F	A	N	K	L	G	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	K	I	L	A	P	Y	L	E	M	K	D	S	E	I	R	Q	I	E	C	.	.	.	.	D	S	E	D	M	K	M	R	A	K	Q	L
Template Known Secondary structure								S	S	S					.	.											T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T	T	T												.	.	.	.			S	S
Template Predicted Secondary structure															.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.																	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.										.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.
Query Sequence		E	P	Q	L	P	E	I	Y	E	A	D	E	E	V	K	A	L	I	.	.	.	.	.	.	.	.	.	D	M	A	R	K	L	E	G	V	T	R	N	A	G	K	H	A	G	G
Query Conservation																				.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	A	W	Q	D	Q	E	G	V	H	A	T	P	E	N	L	I	N	A	L	N	K	S	G	L	S	D	L	A	E	S	L	T	N	D	N	E	T	N	S	S	G	P	S	S
Template Known Secondary structure										G	G	G													T	T													S	S		S
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions