Job Description P10443 Confidence 44.48% Date Thu Jan 5 11:32:19 GMT 2012 Rank 143 Aligned Residues 178 % Identity 16% Template c1ug3A_ PDB info PDB header:translation Chain: A: PDB Molecule:eukaryotic protein synthesis initiation factor PDBTitle: c-terminal portion of human eif4gi Resolution 2.24 Å

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		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		T	E	D	Y	L	V	K	R	A	K	E	G	L	E	E	R	L	A	F	L	F	P	D	E	E	E	R	L	K	R	R	P	E	Y	D	E	R	L	E	T	E	L	Q	V	I	N	Q	M	G	F	P	G	Y	F	L	.	I	V	M	E	F	I	Q	W	S	K	D	N	G	V	P	V	G	P	G	R	G	S	G	A
Query Conservation																																																									.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.																	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Sequence		S	E	E	E	L	E	K	K	S	K	A	I	I	E	E	Y	L	H	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	M	K	E	A	V	Q	C	V	Q	E	L	A	S	P	S	L	L	F	I	F	V	R	H	G	V	E	S	T	L	E	R	S	A	I	A	.	.	.	.	R	E	H	M
Template Known Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T			G	G	G													T	T	T					.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template SS confidence
		1239	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.																	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.					.	.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.			.	.	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		G	S	L	V	A	Y	A	L	K	I	T	D	L	D	P	L	E	F	D	L	L	F	E	R	F	L	N	P	E	R	V	S	M	P	D	F	D	V	D	F	C	M	E	K	R	D	Q	V	I	E	H	V	A	D	M	Y	G	R	D	A	V	S	Q	I	I	T	F	G	T	M	A	A	K	A	V	.	.	I	R	D
Query Conservation																																																																													.	.
Alig confidence																													.	.	.	.												.	.	.	.	.																													.	.
Template Conservation																													.	.	.	.												.	.	.	.	.
Template Sequence		G	Q	L	L	H	Q	L	L	C	A	G	H	L	S	T	A	Q	Y	Y	Q	G	L	Y	E	I	L	E	.	.	.	.	L	A	E	D	M	E	I	D	I	P	H	.	.	.	.	.	V	W	L	Y	L	A	E	L	V	T	P	I	L	Q	E	G	G	V	P	M	G	E	L	F	R	E	I	T	K	P	L	R	P
Template Known Secondary structure											T	T	S	S															.	.	.	.						T	T	T		T	T	.	.	.	.	.										G	G	G	G	S	T	T	S											T	T	T
Template Predicted Secondary structure																													.	.	.	.												.	.	.	.	.
Template SS confidence
		1299	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.					.	.	.	.	1330	.	.	.	.	.	.						.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	R	V	L	G	H	P	Y	G	F	V	D	R	I	S	K	L	I	P	P	D	P	G	M	T	L	A	K	A	F	E	A	E	P	Q	L	P	E	I	Y	E	A	D	E	E	V	K	A	L	I	D
Query Conservation
Alig confidence																					.	.
Template Conservation																					.	.
Template Sequence		L	G	K	A	A	S	L	L	L	E	I	L	G	L	L	C	K	S	M	.	.	G	P	K	K	V	G	T	L	W	R	E	A	G	L	S	W	K	E	F	L	P	E	G	Q	D	I	G	A	F	V	A
Template Known Secondary structure			T																		.	.												T	T			G	G	G	T	S		T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.			.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions