Job Description P10443 Confidence 94.69% Date Thu Jan 5 11:32:19 GMT 2012 Rank 73 Aligned Residues 90 % Identity 14% Template c1k8gC_ PDB info PDB header:dna binding protein/dna Chain: C: PDB Molecule:telomere-binding protein alpha subunit; PDBTitle: crystal structure of the n-terminal domain of oxytricha2 nova telomere end binding protein alpha subunit both3 uncomplexed and complexed with telomeric ssdna Resolution 2.60 Å

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		977	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.		.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.											.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.
Predicted Secondary structure																																.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.																		.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	G	V	R	L	K	D	M	H	P	T	E	R	G	K	V	I	T	A	A	G	L	V	V	A	A	R	V	M	.	V	T	K	R	G	N	R	I	G	I	C	T	L	D	D	R	S	.	.	.	.	.	.	.	.	.	.	G	R	L	E	V	M	L	F	T	D	A	L	D	K	Y	Q	Q	L	L	E	K	D
Query Conservation																																.																		.	.	.	.	.	.	.	.	.	.
Alig confidence													.																			.																		.	.	.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		Y	E	Y	V	E	L	A	K	A	S	L	.	T	S	A	Q	P	Q	H	F	Y	A	V	V	I	D	A	T	F	P	Y	K	T	N	Q	E	R	Y	I	C	S	L	K	I	V	D	P	T	L	Y	L	K	Q	Q	K	G	A	S	D	Y	A	T	L	V	L	Y	A	K	R	F	E	D	L	P	I	I	H	R	A	G
Template Known Secondary structure				B			G	G	G	S		S	.	S	S																					T	T										B	T	T	B	S	S																	S	S	G	G	G	S							T
Template Predicted Secondary structure													.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		1046	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	L	I	V	S	G	Q	V	S	F	D	D	F	S	G	G	L	K	M	T	A	R
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		D	I	I	R	V	H	.	R	A	T	L	R	L	Y	N	G	Q	R	Q	F	N	A	N
Template Known Secondary structure								.								T	T
Template Predicted Secondary structure								.
Template SS confidence
		118	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions