Return to main results Retrieve Phyre Job Id

Job DescriptionP10443
Confidence97.81%DateThu Jan 5 11:32:19 GMT 2012
Rank17Aligned Residues98
% Identity16%Templatec1b8aB_
PDB info PDB header:ligaseChain: B: PDB Molecule:protein (aspartyl-trna synthetase); PDBTitle: aspartyl-trna synthetase
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   978.980.........990.........1000.........1010.........1020.........1030. ........1040.........1050..
Predicted Secondary structure 



















.....



Query SS confidence 





















































. . . . .




















Query Sequence  GGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVMLF. . . . . TDALDKYQQLLEKDRILIVSG
Query Conservation         
     
  
 
 
 
       

 
  


  


  
  
  

.....
  
      
     
 
 
Alig confidence 


























....



.

















.....








.










Template Conservation 

    

     
  
 
 


   
....  

.
 

 


  
 



                .
  

 
 
 
Template Sequence  RTHYSSEITEELNGQKVKVAGWVWEVK. . . . DLGG. IKFLWIRDRDGIVQITAPKKKVDPELFKLIPK. LRSEDVVAVEG
Template Known Secondary structure 
S

GGG

GGGTT
....
SS.TTGGGS
GGG.

TT
Template Predicted Secondary structure 









....



.








.




Template SS confidence 















































































   1003......1010.........1020......... 1030... ......1040.........1050.........1060..... ....1070......
 
   1053......1060.. .......1070.........1080.
Predicted Secondary structure 



.





Query SS confidence 









.


















Query Sequence  QVSFDDFSGG. LKMTAREVMDIDEAREKYA
Query Conservation   
        .  
    
  
        
Alig confidence 









.


















Template Conservation   
         


    
 


 
   

Template Sequence  VVNFTPKAKLGFEILPEKIVVLNRAETPLP
Template Known Secondary structure 
TTSTTS


SS
S
Template Predicted Secondary structure 












Template SS confidence 





























   1077..1080.........1090.........1100......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions