Return to main results Retrieve Phyre Job Id

Job DescriptionP09099
Confidence100.00%DateWed Jan 25 15:20:14 GMT 2012
Rank19Aligned Residues236
% Identity23%Templated2p3ra1
SCOP infoRibonuclease H-like motif Actin-like ATPase domain Glycerol kinase
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.... .....70.........
Predicted Secondary structure 
















..





Query SS confidence 






























































. .














Query Sequence  YIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHS. . LQDVKALGIAGQMHG
Query Conservation   



 



 

 
 
  
 
               
  
 
              
     ..   
 

 

     
Alig confidence 






























































..














Template Conservation   








 

 
 
  
  
              
  
 
           
             
  
 

     
Template Sequence  IVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRET
Template Known Secondary structure 
SS
TT




B
SSTT


TT

GGG
SS
Template Predicted Secondary structure 




























Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   80...... ...90.........100.........110... ......120.........130.........140........ .150..
Predicted Secondary structure 


.











..









....
Query SS confidence 






.


























. .


































. . . .



Query Sequence  ATLLDAQ. QRVLRPAILWNDGRCAQECTLLEARVP. . QSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDK. . . . VLLP
Query Conservation   
  
  .
  
   
 
 
 
       
     ..     

          

 

    

       ....    
Alig confidence 






.


























..


































....



Template Conservation   
  
   
 

   
 
 
 

      
            

          

 

    
                
Template Sequence  TIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTV
Template Known Secondary structure  BTTT

BSS

TT

TTTT



SSTTSSTTTT

Template Predicted Secondary structure 





























Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   153......160.. .......170.........180.........190.........200.........210.........220.........230
Predicted Secondary structure 

..




































Query SS confidence 









. .



































































Query Sequence  KDYLRLRMTG. . EFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMATVPVVAG
Query Conservation   


   


..    
 
 

 
 
 
     
   

   

    

 
   
   
 
    
   

   

  
Alig confidence 









..



























































...




Template Conservation   
 
   


      
 
 

 


 
     
    
   

    

 
   
   
 
    
   

...

  
Template Sequence  DTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIDGKGGTRI. . . PISGI
Template Known Secondary structure  TTTS

TTSSTTTT
T

GGG


S
TT
TTS

...
Template Predicted Secondary structure 





































...
Template SS confidence 















































































   166...170.........180.........190.........200.........210.........220.........230....... ..240..
 
   231........240
Predicted Secondary structure 


Query SS confidence 









Query Sequence  GGDNAAGAVG
Query Conservation    
  

  
Alig confidence 









Template Conservation    
  

  
Template Sequence  AGDQQAALFG
Template Known Secondary structure 
Template Predicted Secondary structure 



Template SS confidence 









   243......250..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions