Job Description P09099 Confidence 100.00% Date Wed Jan 25 15:20:14 GMT 2012 Rank 8 Aligned Residues 481 % Identity 19% Template c3jvpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribulokinase; PDBTitle: crystal structure of ribulokinase from bacillus halodurans Resolution 2.31 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.												.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	I	G	I	D	L	G	T	S	G	V	K	V	I	L	L	N	.	E	Q	G	E	V	V	A	A	Q	T	E	K	L	.	.	.	.	.	.	.	.	.	.	.	T	V	S	R	P	H	P	L	W	S	E	Q	D	P	E	Q	W	W	Q	A	T	D	R	A	M	K	A	L	G	D	Q	H	S	L	Q	D	V	K
Query Conservation																			.														.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.														.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation																																																																													.
Template Sequence		T	I	G	V	D	Y	G	T	E	S	G	R	A	V	L	I	D	L	S	N	G	Q	E	L	A	D	H	V	T	P	Y	R	H	G	V	I	D	Q	Y	L	P	N	T	N	I	K	L	G	H	E	W	A	L	Q	H	P	L	D	Y	V	E	V	L	T	T	S	V	P	A	V	M	K	E	D	A	.	D	D	V	I
Template Known Secondary structure									S	S									T	T	T												T	T			B	S	S	B	S	T	T	S			B			T	T														T	T											.	S
Template Predicted Secondary structure																																																																													.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.												.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		A	L	G	I	A	G	Q	M	H	G	A	T	L	L	D	A	Q	Q	R	V	L	R	P	A	I	.	.	.	.	.	.	.	.	.	.	.	L	W	N	D	G	R	C	A	Q	E	C	T	L	L	E	A	R	V	P	Q	.	.	.	.	S	R	V	I	T	G	N	L	M	M	P	G	F	T	A	P	K	L	L	W
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation
Template Sequence		G	I	G	V	D	F	T	A	C	T	M	L	P	V	D	E	E	G	Q	P	L	C	L	L	A	Q	Y	K	D	N	P	H	S	W	V	K	L	W	K	H	H	A	A	Q	D	K	A	N	A	I	N	E	M	A	E	K	R	G	E	A	F	L	P	R	Y	G	G	K	I	S	S	E	W	M	I	A	K	V	W	Q
Template Known Secondary structure									S	S							T	T	S		B	G	G	G	S	S	S	T	T	S	S	G	G	G	S				T	T			T	T															T		T	T	G	G	G	G	T	T				S	S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200							.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.
Query Sequence		V	Q	R	H	E	P	E	I	F	R	Q	I	D	K	V	L	L	P	K	D	Y	L	R	L	R	M	T	G	E	F	A	S	D	M	S	D	A	A	G	T	M	W	L	D	V	A	K	R	D	W	S	D	V	M	L	Q	A	C	D	L	S	R	D	Q	M	P	.	.	.	.	.	.	A	L	Y	E	G	S	E	I
Query Conservation																																																																				.	.	.	.	.	.
Alig confidence																																																																				.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	D	E	A	E	D	V	Y	N	R	T	D	Q	F	L	E	A	T	D	W	I	V	S	Q	M	T	G	K	I	V	K	N	S	C	T	A	G	Y	K	A	I	W	H	K	R	E	G	Y	P	S	N	E	F	F	K	A	L	D	P	R	L	E	H	L	T	T	T	K	L	R	G	D	I	V	P	L	G	E	R
Template Known Secondary structure														S															S	S												S			B	T	T	T	B	S								T	T		G	G	G	T	T	S	T	T	T	T	T		S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		T	G	A	L	L	P	E	V	A	K	A	W	G	M	A	.	T	V	P	V	V	A	G	G	G	D	N	A	A	G	A	V	G	V	G	M	V	D	A	N	Q	A	M	L	S	L	G	T	S	G	V	Y	F	A	V	S	E	G	F	L	S	K	P	E	S	A	V	H	S	F	C	H	A	L	P	Q	R	W	H	L
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		A	G	G	L	L	P	E	M	A	E	K	M	G	L	N	P	G	I	A	V	A	V	G	N	V	D	A	H	A	A	V	P	A	V	G	V	T	T	P	G	K	L	V	M	A	M	G	T	S	I	C	H	M	L	L	G	E	K	E	Q	E	V	E	G	M	C	G	V	V	E	D	G	I	I	P	G	Y	L	G	Y
Template Known Secondary structure														T	S		T	T									T	T	T	T					T	T			S	S								S	S	S								S	S					T	T		S					T	S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.													.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	V	M	L	S	A	A	S	C	L	D	W	A	A	K	L	T	G	L	.	.	.	.	.	.	.	.	.	.	.	.	S	N	V	P	A	L	I	A	A	A	Q	Q	A	D	E	S	A	E	P	V	W	F	L	P	Y	L	S	G	E	R	T	P	H	N	N	P	Q	A	K	G	V	F	F	G	L	T	H	Q
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	G	Q	S	A	V	G	D	I	F	A	W	F	V	K	H	G	V	S	A	A	T	F	D	E	A	Q	E	K	G	V	N	V	H	A	L	L	E	E	K	A	S	Q	L	R	P	G	E	S	G	L	L	A	L	D	W	W	N	G	N	R	S	I	L	V	D	T	E	L	S	G	M	L	L	G	Y	T	L	Q
Template Known Secondary structure						S		S											T	S											T	T												T	S	S		T	T	S	S								T	T				T	T	T			S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		H	G	P	N	E	L	A	R	A	V	L	E	G	V	G	Y	A	L	A	D	G	M	D	V	V	H	A	C	G	I	K	P	Q	S	V	T	L	I	G	G	.	G	A	R	S	E	Y	W	R	Q	M	L	A	D	I	S	G	Q	Q	L	D	Y	R	T	G	G	D	V	G	P	A	L	G	A	A	R	L	A	Q	I
Query Conservation																																										.
Alig confidence																																										.																											.
Template Conservation																																																																					.
Template Sequence		T	K	P	E	E	I	Y	R	A	L	L	E	A	T	A	F	G	T	R	A	I	V	D	A	F	H	G	R	G	V	E	V	H	E	L	Y	A	C	G	G	L	P	Q	K	N	H	L	L	M	Q	I	F	A	D	V	T	N	R	E	I	K	V	A	A	S	K	Q	.	T	P	A	L	G	A	A	M	F	A	S	V
Template Known Secondary structure																												T	T	T										S	S																	T	S					B			S	S	.
Template Predicted Secondary structure																																																																					.
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.		.	.	.	.	480	.	.	.	.	.	.	.
		435	.	.	.					.	440	.	.	.	.	.	.	.	.	.		450	.		.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure						.	.	.	.												.			.
Query SS confidence						.	.	.	.												.			.
Query Sequence		A	A	N	P	.	.	.	.	E	K	S	L	I	E	L	L	P	Q	L	.	P	L	.	E	Q	S	H	L	P	D	A	Q	R	Y	A	A	Y	Q	P	R	R	E	T	F	R	R	L	Y	Q	Q	L	L	P	L	M	A
Query Conservation						.	.	.	.												.			.
Alig confidence						.	.	.	.												.			.
Template Conservation
Template Sequence		A	A	G	S	E	V	G	G	Y	D	S	I	E	E	A	A	K	K	M	G	R	V	K	D	E	T	F	K	P	I	P	E	H	V	A	I	Y	E	K	L	Y	Q	E	Y	V	T	L	H	D	Y	F	G	R	G	A	N
Template Known Secondary structure					S	S	S	S	S		S												B		S			B																										S	S	S
Template Predicted Secondary structure
Template SS confidence
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.