Job Description P09099 Confidence 100.00% Date Wed Jan 25 15:20:14 GMT 2012 Rank 7 Aligned Residues 478 % Identity 26% Template c3hz6A_ PDB info PDB header:transferase Chain: A: PDB Molecule:xylulokinase; PDBTitle: crystal structure of xylulokinase from chromobacterium violaceum Resolution 1.65 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure				.																																																												.
Query SS confidence				.																																																												.
Query Sequence		M	Y	.	I	G	I	D	L	G	T	S	G	V	K	V	I	L	L	N	E	Q	G	E	V	V	A	A	Q	T	E	K	L	T	V	S	R	P	H	P	L	W	S	E	Q	D	P	E	Q	W	W	Q	A	T	D	R	A	M	K	A	L	G	D	.	Q	H	S	L	Q	D	V	K	A	L	G	I	A	G	Q	M	H
Query Conservation				.																																																												.
Alig confidence				.																																																												.
Template Conservation
Template Sequence		F	Y	I	A	T	F	D	I	G	T	T	E	V	K	A	A	L	A	D	R	D	G	G	L	H	F	Q	R	S	I	A	L	E	T	Y	G	D	G	N	G	P	V	E	Q	D	A	G	D	W	Y	D	A	V	Q	R	I	A	S	S	W	W	Q	S	G	V	D	A	R	R	V	S	A	I	V	L	S	G	Q	X	Q
Template Known Secondary structure											S	S									T	T	S													B	S	T	T	S	S																						T	T	T			G	G	G											S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.
Predicted Secondary structure																																					.	.																																				.
Query SS confidence																																					.	.																																				.
Query Sequence		G	A	T	L	L	D	A	Q	Q	R	V	L	R	P	A	I	L	W	N	D	G	R	C	A	Q	E	C	T	L	L	E	A	R	V	P	.	.	Q	S	R	V	I	T	G	N	L	M	M	P	G	F	T	A	P	K	L	L	W	V	Q	R	H	E	P	E	I	F	R	Q	I	D	K	.	V	L	L	P	K	D	Y
Query Conservation																																					.	.																																				.
Alig confidence																																					.	.																																				.
Template Conservation
Template Sequence		N	F	L	P	L	D	Q	D	H	E	P	L	H	R	A	V	L	Y	S	D	K	R	P	L	K	E	A	E	E	I	N	A	R	H	G	A	D	N	L	W	S	A	L	E	N	P	X	T	A	A	S	I	L	P	K	L	V	F	W	R	A	S	F	P	Q	A	F	G	R	L	R	H	V	V	L	G	A	K	D	Y
Template Known Secondary structure			B					T	T	S		B	S	S					T	T																									S	S			S	T	T	S																	T	T							S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		L	R	L	R	M	T	G	E	F	A	S	D	M	S	D	A	A	G	T	M	W	L	D	V	A	K	R	D	W	S	D	V	M	L	Q	A	C	D	L	S	R	D	Q	M	P	A	L	Y	E	G	S	E	I	T	G	A	L	L	P	E	V	A	K	A	W	G	M	A	.	T	V	P	V	V	A	G	G	G	D	N
Query Conservation																																																																						.
Alig confidence																																																																						.
Template Conservation
Template Sequence		V	V	L	R	L	T	G	R	H	A	T	D	R	T	N	A	S	T	T	G	L	Y	R	P	K	D	D	A	W	H	V	E	L	L	A	D	Y	G	F	S	L	D	L	X	P	R	L	L	E	P	G	E	Q	V	G	G	V	S	A	L	A	A	R	Q	T	G	F	V	S	G	T	P	V	L	C	G	L	G	D	A
Template Known Secondary structure								S												T	T				T	T	T	T										T	T			G	G	G	S						T	T	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.																																									.	.	.
Query SS confidence																																					.	.																																									.	.	.
Query Sequence		A	A	G	A	V	G	V	G	M	V	D	A	N	Q	A	M	L	S	L	G	T	S	G	V	Y	F	A	V	S	E	G	F	L	S	K	.	.	P	E	S	A	V	H	S	F	C	H	A	L	P	Q	R	W	H	L	M	S	V	M	L	S	A	A	S	C	L	D	W	A	A	K	L	T	G	L	S	N	.	.	.
Query Conservation																																					.	.																																									.	.	.
Alig confidence																																					.	.																																									.	.	.
Template Conservation
Template Sequence		G	A	A	T	L	G	V	G	V	L	D	D	E	D	A	Y	L	H	L	G	T	T	G	W	L	A	R	L	T	Q	T	D	P	V	G	D	X	P	V	G	T	I	F	R	L	A	G	I	I	A	G	K	T	L	Q	V	A	P	V	L	N	A	G	N	I	L	Q	W	A	L	T	L	V	G	H	R	P	G	E	D
Template Known Secondary structure								T	T			S	T	T							S	S	S														S			S	S							S	S	S	T	T									S	S	S								G	G	G	G	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
					310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	V	P	A	L	I	A	A	A	Q	Q	A	D	E	S	A	E	P	V	W	F	L	P	Y	L	S	G	E	R	T	P	H	N	N	P	Q	A	K	G	V	F	F	G	L	T	H	Q	H	G	P	N	E	L	A	R	A	V	L	E	G	V	G	Y	A	L	A	D	G	M	D	V	V	H	A	C	G	I	K
Query Conservation		.	.	.
Alig confidence		.	.	.																																																																											.	.
Template Conservation																																																																															.	.
Template Sequence		C	A	E	Y	F	H	X	A	A	A	E	V	Q	G	V	T	V	P	D	G	L	L	F	V	P	Y	L	H	A	E	R	C	P	V	E	L	P	A	P	R	G	A	L	L	G	V	T	G	A	T	T	R	A	Q	I	L	L	A	V	L	E	G	A	A	L	S	L	R	W	C	A	E	L	L	G	X	E	.	.	K
Template Known Secondary structure		S												T	T					T	T							S	S		B		S	S	S		B	S	S										T	T																										T	G	G	.	.	G
Template Predicted Secondary structure																																																																															.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.			400
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		P	Q	S	V	T	L	I	G	G	G	A	R	S	E	Y	W	R	Q	M	L	A	D	I	S	G	Q	Q	L	D	Y	R	T	G	G	D	V	G	P	A	L	G	A	A	R	L	A	Q	I	A	A	N	P	E	K	S	L	I	E	L	L	P	Q	L	.	P	L	E	Q	S	H	L	P	D	A	Q	R	Y	A	A	Y
Query Conservation																																																																	.
Alig confidence																																																																	.
Template Conservation
Template Sequence		V	G	L	L	K	V	V	G	G	G	A	R	S	E	A	W	L	R	X	I	A	D	N	L	N	V	S	L	L	V	K	P	D	A	H	L	H	P	L	R	G	L	A	A	L	A	A	V	E	L	E	W	S	H	S	I	Q	D	F	L	R	E	A	D	L	R	S	N	I	L	H	P	Q	P	C	D	E	G	R	R
Template Known Secondary structure									S	G	G	G	G													T									G	G	G														T	T	S		S											T					B
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	R	R	E	T	F	R	R	L	Y	Q	Q	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	K	F	E	R	F	K	Q	C	V	E	T	L	G
Template Known Secondary structure																T
Template Predicted Secondary structure
Template SS confidence
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.