Job Description P09099 Confidence 100.00% Date Wed Jan 25 15:20:14 GMT 2012 Rank 10 Aligned Residues 481 % Identity 21% Template c3gg4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycerol kinase; PDBTitle: the crystal structure of glycerol kinase from yersinia2 pseudotuberculosis Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		Y	I	G	I	D	L	G	T	S	G	V	K	V	I	L	L	N	E	Q	G	E	V	V	A	A	Q	T	E	K	L	T	V	S	R	P	H	P	L	W	S	E	Q	D	P	E	Q	W	W	Q	A	T	D	R	A	M	K	A	L	G	D	Q	.	.	H	S	L	Q	D	V	K	A	L	G	I	A	G	Q	M	H	G
Query Conservation																																																															.	.
Alig confidence																																																															.	.																.
Template Conservation																																																																																.
Template Sequence		F	I	G	V	D	V	G	T	G	S	A	R	A	G	V	F	D	L	Q	G	R	X	V	G	Q	A	S	R	E	I	T	X	F	K	P	K	A	D	F	V	E	Q	S	S	E	N	I	W	Q	A	V	C	N	A	V	R	D	A	V	N	Q	A	D	I	N	P	I	Q	V	K	G	L	G	F	D	A	T	C	.	S
Template Known Secondary structure									S	S									T	T														B		S	S	T	T																									T			G	G	G										S	.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.
		80	.	.	.	.	.	.	.	.	.	90										.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure													.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.
Query Sequence		A	T	L	L	D	A	Q	Q	R	V	L	.	.	.	.	.	.	.	.	.	R	P	A	I	L	W	N	D	G	R	C	A	Q	E	C	T	L	L	E	A	R	V	P	Q	S	R	V	I	T	G	N	L	M	M	P	G	F	T	A	P	K	L	L	W	V	Q	R	H	E	P	E	I	F	R	Q	I	D	K	V	L
Query Conservation													.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	V	L	D	K	E	G	N	P	L	T	V	S	P	S	G	R	N	E	Q	N	V	I	V	W	X	D	H	R	A	I	T	Q	A	E	R	I	N	A	T	K	H	P	V	L	E	F	V	G	G	V	I	S	P	E	X	Q	T	P	K	L	L	W	L	K	Q	H	X	P	N	T	W	S	N	V	G	H	L	F
Template Known Secondary structure							T	T	S		B				S	T	T			T	T						T	T			T	T											T		G	G	G	G	G	G	T	T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.									210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.
Query Sequence		L	P	K	D	Y	L	R	L	R	M	T	G	E	F	A	S	D	M	S	D	A	A	G	T	M	W	L	D	V	A	K	R	D	W	S	D	V	M	L	Q	A	C	D	L	S	R	D	Q	M	P	A	L	Y	E	G	S	E	I	T	.	.	.	.	.	.	.	.	G	A	L	L	P	E	V	A	K	A	W	G	M
Query Conservation																																																													.	.	.	.	.	.	.	.
Alig confidence																																																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	P	D	F	L	T	W	R	A	T	K	D	E	T	R	S	L	C	S	T	V	C	K	W	T	Y	L	G	H	E	D	R	W	D	P	S	Y	F	K	L	V	G	L	A	D	L	L	D	N	N	A	A	K	I	G	A	T	V	K	P	X	G	A	P	L	G	H	G	L	S	Q	R	A	A	S	E	X	G	L
Template Known Secondary structure													S													S			B	T	T	T	T	B										T		G	G	G	G					T	T	T		S					T	T		B		T	T	S	S									T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		223		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		A	.	T	V	P	V	V	A	G	G	G	D	N	A	A	G	A	V	G	V	G	M	V	D	A	N	Q	A	M	L	S	L	G	T	S	G	V	Y	F	A	V	S	E	G	F	L	S	K	P	E	S	A	V	H	S	F	C	H	A	L	P	Q	R	W	H	L	M	S	V	M	L	S	A	A	S	C	L	D	W	A
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		I	P	G	T	A	V	S	V	S	I	I	D	A	H	A	G	T	I	G	I	L	G	A	S	D	R	R	I	A	L	I	G	G	T	S	T	A	H	X	A	X	S	R	S	A	H	F	I	S	G	I	W	G	P	Y	Y	S	A	I	L	P	E	Y	W	L	N	E	G	G	Q	S	A	T	G	A	L	I	D	H	I
Template Known Secondary structure			T	T				B														T	T											S	S	S								S	S					T	T	S						T	S	S	S	T	T									S		S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		302	.	.	.														.	.	.	.	310	.	.	.	.	.	.	.	.	.								320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																																										.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																																										.
Query Sequence		A	K	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	S	N	V	P	A	L	I	A	A	A	Q	Q	.	.	.	.	.	.	.	A	D	E	S	A	E	P	V	W	F	L	P	Y	L	S	G	E	R	T	P	H	N	N	P	Q	A	K	G	V	F	F	G	L	T	H	Q	H	G	P	N	E	.
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																																										.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																																										.
Template Conservation
Template Sequence		I	Q	S	H	P	C	Y	P	A	L	L	E	Q	A	K	N	K	G	E	T	I	Y	E	A	L	N	Y	I	L	R	Q	X	A	G	E	P	E	N	I	A	F	L	T	N	D	I	H	X	L	P	Y	F	H	G	N	R	S	P	R	A	N	P	N	L	T	G	I	I	T	G	L	K	L	S	T	T	P	E	D	X
Template Known Secondary structure					S	T	T											T	T																S	S	G	G	G	S	G	G	G	G	T	T							T	T		B		T	T	T		B	T	T										S			S
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
				361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	L	A	R	A	V	L	E	G	V	G	Y	A	L	A	D	G	M	D	V	V	H	A	C	G	I	K	P	Q	S	V	T	L	I	G	G	G	A	R	S	E	Y	W	R	Q	M	L	A	D	I	S	G	Q	Q	L	D	Y	R	T	G	G	D	V	G	P	A	L	G	A	A	R	L	A	Q	I	A	A	N	P
Query Conservation		.	.
Alig confidence		.	.																																																														.
Template Conservation																																																																	.
Template Sequence		A	L	R	Y	L	A	T	I	Q	A	L	A	L	G	T	R	H	I	I	E	T	X	N	Q	N	G	Y	N	I	D	T	X	X	A	S	G	G	G	T	K	N	P	I	F	V	Q	E	H	A	N	A	T	G	C	A	X	L	L	P	E	E	S	E	.	A	X	L	L	G	S	A	X	X	G	T	V	A	A	G	V
Template Known Secondary structure																									T	T	T											T	T	T	T													T	S						S	S	S		.														T	T	S
Template Predicted Secondary structure																																																																	.
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.		.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
		439	440	.	.	.	.	.	.	.	.	.		450	.	.	.	.	.	.	.	.	.	460	.	.	.		.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure													.															.
Query SS confidence													.															.
Query Sequence		E	K	S	L	I	E	L	L	P	Q	L	.	P	L	E	Q	S	H	L	P	D	A	Q	R	Y	A	.	A	Y	Q	P	R	R	E	T	F	R	R	L	Y	Q	Q	L	L	P	L	M	A
Query Conservation													.															.
Alig confidence													.															.
Template Conservation
Template Sequence		F	E	S	L	P	E	A	X	A	A	X	S	R	I	G	K	T	V	T	P	Q	T	N	K	I	K	A	Y	Y	D	R	K	Y	R	V	F	H	Q	X	Y	H	D	H	X	R	Y	Q	A
Template Known Secondary structure		S	S	S
Template Predicted Secondary structure
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.