|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | L | D | I | R | N | L | T | I | E | F | K | T | G | D | E | W | V | K | A | V | D | R | V | S | M | T | L | T | E | G | E | I | R | G | L | V | G | E | S | G | S | G | K | S | L | I | A | K | A | I | C | G | V | N | K | D | N | W | R | V | T | A | D | R | M | R | F | D | D | I | D | L | L | R | L | S | A | R |
Query Conservation |   |
|
|
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |
|
|
|   |
|   |   |
|
|   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   | . |   |
|
|   |   |
|
|
|   |
|   |   |
|
|   |   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|   |   |   |   | . | . | . | . |   |   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
Template Sequence |   |
G | L | V | Q | F | Q | D | V | S | F | A | Y | P | N | R | P | D | V | . |
L | V | L | Q | G | L | T | F | T | L | R | P | G | E | V | T | A | L | V | G | P | N | G | S | G | K | S | T | V | A | A | L | L | Q | N | L | Y | Q | P | . |
. |
. |
. |
T | G | G | Q | L | L | L | D | G | K | P | L | P | Q | Y | E | H | R |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
| T | T | S | T | T |
| . |
| S |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  | T | T | S | S |
|
| . | . | . | . | S |  |  |  |  |  |  | T | T |  |  | G | G | G | B |
|  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  | . |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
501 | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | |
. | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | |
|
|
|
. | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | R | R | K | L | V | G | H | N | V | S | M | I | F | Q | E | P | Q | S | C | L | D | P | S | E | R | V | G | R | Q | L | M | Q | N | I | P | A | W | T | Y | K | G | R | W | W | Q | R | F | G | W | R | K | R | R | A | I | E | L | L | H | R | V | G | I | K | D | H | K | D | A | M | R | S | F | P | Y | E | L | T | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |
|   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
Alig confidence |   |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   | . | . | . | . |   |   |
|   |   |
|   |
|   |   |   | . | . |
|   |   |   | . |
|
|   |   |
|
|   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
Template Sequence |   |
Y | L | H | . |
. |
. |
. |
R | Q | V | A | A | V | G | Q | E | P | Q | . |
. |
V | F | G | R | . |
S | L | Q | E | N | I | A | Y | G | . |
. |
L | T | Q | K | P | T | M | E | E | I | T | A | A | A | V | K | S | G | A | H | S | F | I | S | G | L | P | Q | G | . |
Y | D | T | E | V | D | E | A | G | S | Q | L | S | G |
Template Known Secondary structure |   |
 |  |  | . | . | . | . |  |  |  |  |  |  |
| S | S |
|
| . | . |
|
| S | S | . | B |  |  |  |  |  |  |
| S | . | . |
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  | T | S | T | T | G | . | G | G |
| B |
|
| S | S |
| S | S | S |
|  |
Template Predicted Secondary structure |   |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|  |  | . |  |  |  |  |  |  |  |  |  | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
576 | . | . | |
|
|
|
. | 580 | . | . | . | . | . | . | . | . | . | |
|
590 | . | . | . | |
. | . | . | . | . | . | 600 | . | . | |
|
. | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | |
. | . | . | . | . | . | . | . | 640 | . | . | . | . | . |
  |
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | C | Q | K | V | M | I | A | I | A | L | A | N | Q | P | R | L | L | I | A | D | E | P | T | N | S | M | E | P | T | T | Q | A | Q | I | F | R | L | L | T | R | L | N | Q | N | S | N | T | T | I | L | L | I | S | H | D | L | Q | M | L | S | Q | W | A | D | K | I | N | V | L | Y | C | G | Q | T | V | E | T | A |
Query Conservation |   |
|   |   |
|
|
|   |
|
|
|
|
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|
|   |
|
|
|
|
|   |   |
|   |   |
|
|
|
|
|   |
|
|   |   |
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|   |
|
|
|
|
|   |   |   |
|   |
|
|
|
|
|
|
|   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   | . |   |   |   |
|   |
|   |
|
|   |   |
|   |
|   |   |   |
|
Template Sequence |   |
G | Q | R | Q | A | V | A | L | A | R | A | L | I | R | K | P | C | V | L | I | L | D | D | A | T | S | A | L | D | A | N | S | Q | L | Q | V | E | Q | L | L | Y | E | S | P | E | R | Y | S | R | S | V | L | L | I | T | Q | H | L | S | L | V | . |
E | Q | A | D | H | I | L | F | L | E | G | G | A | I | R | E | G | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  | S | T | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
| G | G | G | G | G |
|  |  |  |  |  |
| S |
|  |  |  |  | . |  | T |
| S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  | . |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
646 | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | |
. | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . |
  |
  |   |
242 | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | S | K | E | L | V | T | M | P | H | H | P | Y | T |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
T | H | Q | Q | L | M | E | K | K | G | C | Y | W | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | T | S |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
725 | . | . | . | . | 730 | . | . | . | . | . | . | . | . |
  |