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Job DescriptionP0AAH4
Confidence100.00%DateThu Jan 5 11:12:56 GMT 2012
Rank53Aligned Residues206
% Identity23%Templatec3bk7A_
PDB info PDB header:hydrolyase/translationChain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  PLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSAR
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Template Sequence  TLVEYPRLVKDYGSF. . . . . KLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEP. . . . TEGKVEWDLT. . . . . . . .
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   342.......350...... ...360.........370.........380.........390.... .....400....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTE
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Template Sequence  . . . . . . . . . VAYKPQ. . YIKAEYEGTVYELLSKIDSSK. . . . . . . . . . LNSNFYKTELLKPLGII. . . DLYDRNVEDLSG
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   405....410 .........420.........430. ........440........ .450.........460
 
   162.......170.........180.........190.........200.........210.........220.........230... ......
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Query Sequence  GECQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHDLQMLSQWADKINVLY. . CGQTVE
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Template Sequence  GELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEPGRHGR
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   461........470.........480.........490.........500.........510.........520.........530.........540
 
   240........
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Query Sequence  TAPSKELVT
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Template Sequence  ALPPMGMRE
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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