Job Description P0AAH4 Confidence 96.90% Date Thu Jan 5 11:12:56 GMT 2012 Rank 178 Aligned Residues 147 % Identity 14% Template c3bgwD_ PDB info PDB header:replication Chain: D: PDB Molecule:dnab-like replicative helicase; PDBTitle: the structure of a dnab-like replicative helicase and its interactions2 with primase Resolution 3.91 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	E	G	E	I	R	G	L	V	G	E	S	G	S	G	K	S	L	I	A	K	A	I	C	G	V	N	K	D	N	W	R	V	T	A	D	R	M	R	F	D	D	I	D	L	L	R	L	S	A	R	E	R	R	K	L	V	G	H	N	V	S	M	I	F	Q	E	P	Q	S	C	L	D	P	S	E	R	V	G
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.
Template Sequence		Y	K	R	R	N	F	V	L	I	A	A	R	P	S	M	G	K	T	A	F	A	L	K	Q	A	K	N	M	S	D	N	D	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	L	H	S	L	E	.	.	.	.	.	.	.	.	M	G	K	K
Template Known Secondary structure		B		S	S									S	S	S	S															T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.																												.	.	.	.	230	.	.									.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.							.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.					.	.	.
Predicted Secondary structure																										.	.	.	.	.	.																																				.								.	.	.	.
Query SS confidence																										.	.	.	.	.	.																																				.								.	.	.	.
Query Sequence		R	Q	L	M	Q	N	I	P	A	W	T	Y	K	G	R	W	W	Q	R	F	G	W	R	K	.	.	.	.	.	.	R	R	A	I	E	L	L	H	R	V	G	I	K	D	H	K	D	A	M	R	S	F	P	Y	E	L	T	E	G	E	C	Q	K	V	M	.	I	A	I	A	L	A	N	.	.	.	.	Q	P	R
Query Conservation																										.	.	.	.	.	.																																				.								.	.	.	.
Alig confidence																										.	.	.	.	.	.											.	.	.	.	.	.																				.								.	.	.	.
Template Conservation																																										.	.	.	.	.	.
Template Sequence		E	N	I	K	R	L	I	V	T	A	G	S	I	N	A	Q	K	I	K	A	A	R	R	D	F	A	S	E	D	W	G	K	L	S	M	A	I	G	E	I	.	.	.	.	.	.	S	N	S	N	I	N	I	F	D	K	A	G	Q	S	V	N	Y	I	W	S	K	T	R	Q	T	K	R	K	N	P	G	K	R	V
Template Known Secondary structure												S									T	T	G	G	G	T			S													.	.	.	.	.	.		T	S								S	S		B															S		S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.							.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		179	180	.	.	.	.								.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.
Query Sequence		L	L	I	A	D	E	.	.	.	.	.	.	.	P	T	N	S	M	E	P	T	T	Q	A	Q	I	F	R	L	L	T	R	L	N	Q	N	S	N	T	T	I	L	L	I	S	H
Query Conservation								.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	M	I	D	Y	L	Q	L	L	E	P	A	K	A	N	D	S	R	T	N	Q	I	S	Q	I	S	R	D	L	K	K	M	A	R	E	L	D	V	V	V	I	A	L	S	Q
Template Known Secondary structure								S	S	S	S	B		S		S	S	S																					T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions