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Job DescriptionP0AAH4
Confidence100.00%DateThu Jan 5 11:12:56 GMT 2012
Rank34Aligned Residues216
% Identity19%Templatec2nq2C_
PDB info PDB header:metal transportChain: C: PDB Molecule:hypothetical abc transporter atp-binding protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter.
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  PLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSAR
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Template Sequence  KALSVENLGFYYQAEN. . . FLFQQLNFDLNKGDILAVLGQNGCGKSTLLDLLLGIHRP. . . . IQGKIEVYQS. . . . . . . .
Template Known Secondary structure  TTTT...TT


SSSSTTSS

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   3......10........ .20.........30.........40.........50....... ..60.......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTE
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Template Sequence  . . . . . . . . . IGFVPQFF. . SSPFAYSVLDIVLMGRSTHIN. . TFAKPKSHDYQVAMQALDYLNLT. . . HLAKREFTSLSG
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BGGGGGGS
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TT
G...GGTTSBGGGS
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   68.70..... ....80.........90...... ...100.........110......... 120.........130.
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  GECQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHDLQMLSQWADKINVLYCGQTVETA
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Template Sequence  GQRQLILIARAIASECKLILLDEPTSALDLANQDIVLSLLIDLAQSQNMTVVFTTHQPNQVVAIANKTLLLNKQNFK. FG
Template Known Secondary structure  TT
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   132.......140.........150.........160.........170.........180.........190.........200........ .210
 
   242.......
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Query Sequence  PSKELVTM
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Template Sequence  ETRNILTS
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   211.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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