Job Description P0AAH4 Confidence 100.00% Date Thu Jan 5 11:12:56 GMT 2012 Rank 55 Aligned Residues 230 % Identity 13% Template c2iw3B_ PDB info PDB header:translation Chain: B: PDB Molecule:elongation factor 3a; PDBTitle: elongation factor 3 in complex with adp Resolution 2.4 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	L	D	I	R	N	L	T	I	E	F	K	T	G	D	E	W	V	K	A	V	D	R	V	S	M	T	L	T	E	G	E	I	R	G	L	V	G	E	S	G	S	G	K	S	L	I	A	K	A	I	C	G	V	N	K	D	N	W	R	V	T	A	D	R	M	R	F	D	D	I	D	L	L	R	L	S	A	R
Query Conservation
Alig confidence																					.	.																																						.	.	.	.
Template Conservation																					.	.																																						.	.	.	.
Template Sequence		A	I	V	K	V	T	N	X	E	F	Q	Y	P	G	T	S	K	P	Q	.	.	I	T	D	I	N	F	Q	C	S	L	S	S	R	I	A	V	I	G	P	N	G	A	G	K	S	T	L	I	N	V	L	T	G	E	L	L	P	.	.	.	.	T	S	G	E	V	Y	T	H	E	N	C	R	I	A	Y	I	K	Q
Template Known Secondary structure			S											T	T		S	S		S	.	.										T	T							S	S													T	T	S	S			.	.	.	.	S								T	T
Template Predicted Secondary structure																					.	.																																						.	.	.	.
Template SS confidence
		664	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.			.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.					720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	R	K	L	V	G	H	N	V	S	M	I	F	Q	E	P	Q	S	C	L	D	P	S	E	R	V	G	R	Q	L	M	Q	N	I	P	A	W	T	Y	K	G	R	W	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	A	F	A	H	I	E	S	H	L	D	K	T	P	S	E	Y	I	Q	W	R	F	Q	T	G	E	D	R	E	T	X	D	R	A	N	R	Q	I	N	E	N	D	A	E	A	X	N	K	I	F	K	I	E	G	T	P	R	R	I	A	G	I	H	S	R	R	K	F	K	N	T	Y	E	Y	E	C	S	F	L	L
Template Known Secondary structure							G	G	G		T	T	S										T	T	T	S	S		T	T	T	T	T	T	T	S					S	S		S	S	S	T	T						T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		738	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.
																																																	127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	F	G	W	R	K	R	R	A	I	E	L	L	H	R	V	G	I	K	D	H	K	D	A	M	R	S	F	P	Y	E	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																																																					.
Template Sequence		G	E	N	I	G	X	K	S	E	R	W	V	P	X	X	S	V	D	N	A	W	I	P	R	G	E	L	V	E	S	H	S	K	X	V	A	E	V	D	X	K	E	A	L	A	S	G	Q	F	R	P	L	T	R	K	E	I	E	E	H	C	S	X	L	G	L	D	.	P	E	I	V	S	H	S	R	I	R	G	L
Template Known Secondary structure				S	S	S	S	T	T								G	G	G						G	G	G	T																			T	T																	T	T			.							S		G	G	G	S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		818	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.		.	.	.	.	.	890	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	G	E	C	Q	K	V	M	I	A	I	A	L	A	N	Q	P	R	L	L	I	A	D	E	P	T	N	S	M	E	P	T	T	Q	A	Q	I	F	R	L	L	T	R	L	N	Q	N	S	N	T	T	I	L	L	I	S	H	D	L	Q	M	L	S	Q	W	A	D	K	I	N	V	L	Y	C	G	Q	T	V	E
Query Conservation
Alig confidence																																														.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		S	G	G	Q	K	V	K	L	V	L	A	A	G	T	W	Q	R	P	H	L	I	V	L	D	E	P	T	N	Y	L	D	R	D	S	L	G	A	L	S	K	A	L	K	E	.	.	.	.	F	E	G	G	V	I	I	I	T	H	S	A	E	F	T	K	N	L	T	E	E	V	W	A	V	K	D	G	R	X	T	P
Template Known Secondary structure															T	T	T			S							G	G	G	T																.	.	.	.		S	S							S						T	T	T								B	T	T	B
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		897	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940					.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.
		240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		973	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions