Job Description P0AAH4 Confidence 100.00% Date Thu Jan 5 11:12:56 GMT 2012 Rank 50 Aligned Residues 214 % Identity 20% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	I	R	N	L	T	I	E	F	K	T	G	D	E	W	V	K	A	V	D	R	V	S	M	T	L	T	E	G	E	I	R	G	L	V	G	E	S	G	S	G	K	S	L	I	A	K	A	I	C	G	V	N	K	D	N	W	R	V	T	A	D	R	M	R	F	D	D	I	D	L	L	R	L	S	A	R	E	R
Query Conservation
Alig confidence													.	.	.	.	.	.																																								.	.	.	.	.
Template Conservation													.	.	.	.	.	.																																								.	.	.	.	.
Template Sequence		I	E	F	S	D	V	N	F	S	Y	H	.	.	.	.	.	.	R	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	.	.	.	.	.	E	G	D	I	K	I	G	G	K	N	V	N	K	Y	N	R	N	S	I
Template Known Secondary structure													.	.	.	.	.	.		S										T	T								S	T	T	S	S									T	T	S	S			.	.	.	.	.							T	T			G	G	G	S
Template Predicted Secondary structure													.	.	.	.	.	.																																								.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.							.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		R	K	L	V	G	H	N	V	S	M	I	F	Q	E	P	Q	S	C	L	D	P	S	E	R	V	G	R	Q	L	M	Q	N	I	P	A	W	T	Y	K	G	R	W	W	Q	R	F	G	W	R	K	R	R	A	I	E	L	L	H	R	V	G	I	K	D	H	K	D	A	M	R	S	.	.	F	P	Y	E	L	T	E
Query Conservation																																																																									.	.
Alig confidence			.	.	.	.											.	.	.															.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation			.	.	.	.											.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	.	.	.	.	S	I	I	G	I	V	P	Q	D	T	.	.	.	I	L	F	N	E	T	I	K	Y	N	I	L	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	K	L	D	A	T	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S	G
Template Known Secondary structure			.	.	.	.	T	T						S	S		.	.	.				S	S	B							T	T	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T													T	T								S	T	T	G	G	G		B
Template Predicted Secondary structure			.	.	.	.											.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92					.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.													.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	C	Q	K	V	M	I	A	I	A	L	A	N	Q	P	R	L	L	I	A	D	E	P	T	N	S	M	E	P	T	T	Q	A	Q	I	F	R	L	L	T	R	L	N	Q	N	S	N	T	T	I	L	L	I	S	H	D	L	Q	M	L	S	Q	W	A	D	K	I	N	V	L	Y	C	G	Q	T	V	E	T	A
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.								.															.
Template Conservation																															.	.	.	.	.	.	.	.	.	.								.															.
Template Sequence		G	E	R	Q	R	I	A	I	A	R	C	L	L	K	D	P	K	I	V	I	F	D	D	S	K	T	E	Y	L	.	.	.	.	.	.	.	.	.	.	F	Q	K	A	V	E	D	.	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K	G
Template Known Secondary structure															T			S													.	.	.	.	.	.	.	.	.	.								.									S	S	G	G	G	S	.	T	T		S							T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.								.															.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.											.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	K	E	L	V	T	M	P	H	H	P	Y	T	Q	A	L	I	R	A
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		T	H	K	D	L	L	K	.	.	L	N	G	E	Y	A	E	M	W	N	M
Template Known Secondary structure									.	.		T	S								T
Template Predicted Secondary structure									.	.
Template SS confidence
		236	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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