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Job DescriptionP0AAH4
Confidence100.00%DateThu Jan 5 11:12:56 GMT 2012
Rank15Aligned Residues244
% Identity21%Templatec2d62A_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:multiple sugar-binding transport atp-binding PDBTitle: crystal structure of multiple sugar binding transport atp-2 binding protein
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  PLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSAR
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Template Sequence  AEVKLINIWKRF. . . . GDVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRXIAGLEEP. . . . TRGQIYIEDNLVADPEKG
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S....TT
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STTSSTSS

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   5....10...... ...20.........30.........40.........50........ .60.........70......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTE
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Template Sequence  VFVPPKERDVAXVFQSY. . ALYPHXTVYDNIAFPLKLRKV. . . . . . PKQEIDKRVREVAEXLGLT. . . ELLNRKPRELSG
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GGGS
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   77..80.........90... ......100.........110.... .....120.........130... ......140.....
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  GECQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHDLQMLSQWADKINVLYCGQTVETA
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Template Sequence  GQRQRVALGRAIIRRPKVFLXDEPLSNLDAKLRVKXRAELKKLQRQLGVTTIYVTHDQVEAXTXGDRIAVXNKGELQQVG
Template Known Secondary structure  SS

SSTTTT

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   146...150.........160.........170.........180.........190.........200.........210.........220.....
 
   242.......250.........260....
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Query Sequence  PSKELVTMPHHPYTQALIRAIPD
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Template Sequence  TPDEVYYKPVNTFVAGFIGSPPX
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   226...230.........240........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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