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Job DescriptionP0AAH4
Confidence100.00%DateThu Jan 5 11:12:56 GMT 2012
Rank7Aligned Residues264
% Identity23%Templatec1z47B_
PDB info PDB header:ligand binding proteinChain: B: PDB Molecule:putative abc-transporter atp-binding protein; PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  LDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSARER
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Template Sequence  IEFVGVEKIYPGGA. . . RSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERP. . . . TKGDVWIGGKRVTDLPPQK.
Template Known Secondary structure 

TTST...T

TT

STTSSTSS

....STT
TT

GGG.
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   15....20........ .30.........40.........50.........60....... ..70.........80......
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  RKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEGE
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Template Sequence  . . . . . RNVGLVFQNY. . ALFQHMTVYDNVSFGLRE. . . . . . KRVPKDEMDARVRELLRFMRLE. . . SYANRFPHELSGGQ
Template Known Secondary structure  .....SSTT
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TTS
TTGGG......TT

TT
G...GGTTS
GGGS
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   87..90...... ...100.........110.... .....120.........130...... ...140.........150
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  CQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHDLQMLSQWADKINVLYCGQTVETAPS
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Template Sequence  QQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTP
Template Known Secondary structure  TT

SSTTTTS


S

STT
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   151........160.........170.........180.........190.........200.........210.........220.........230
 
   244.....250.........260.........270.........280.........290..
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Query Sequence  KELVTMPHHPYTQALIRAIPDFGSAMPHKSRLNTLPGAIPLLEQLPIGC
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Template Sequence  EEVYEKPGTLFVASFIGESNVWT. RAVQNGRIEVAGAALPVDPAVSEGS
Template Known Secondary structure  S
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BTTSSS


TTS
TT
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   231........240.........250... ......260.........270........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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