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Job DescriptionP0AAH4
Confidence97.61%DateThu Jan 5 11:12:56 GMT 2012
Rank112Aligned Residues123
% Identity18%Templatec1xp8A_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:reca protein; PDBTitle: "deinococcus radiodurans reca in complex with atp-gamma-s"
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.........80.........90.........100.........
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Query Sequence  LTEGEIRGLVGESGSGKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCLDPSERVG
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Template Sequence  IPRGRITEIYGPESGGKTTLALAIVAQAQK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . AGGTCAFIDAEHALDP. . . . V
Template Known Secondary structure  TTSSTTSS.............................TT

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   68.70.........80.........90....... ..100.........110... .
 
   110.........120.........130.........140.........150.........160.........170.........180...
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Query Sequence  RQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEGECQKVMIAIALANQPRLLIAD. . . . . .
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Template Sequence  YARALGVNTDELLVSQPDNGEQALEIMELLVRS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GAIDVVVVDSVAALT
Template Known Secondary structure  TT

GGG


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   115....120.........130.........140....... ..150.........160..
 
   184.....190.........200.........210.......
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Query Sequence  . . EPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISH
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Template Sequence  PRAEIPGLQARLMSQALRKLTAILSKTGTAAIFINQ
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   163......170.........180.........190........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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