Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAH4
Confidence98.48%DateThu Jan 5 11:12:56 GMT 2012
Rank87Aligned Residues162
% Identity14%Templatec1wxqA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of gtp binding protein from pyrococcus horikoshii2 ot3
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90......
Predicted Secondary structure 






























...................
Query SS confidence 




























































. . . . . . . . . . . . . . . . . . .
Query Sequence  RGLVGESGSGKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQ. . . . . . . . . . . . . . . . . . .
Query Conservation    


 







   
 

         
 
   
                  
  
 
...................
Alig confidence 























....
































...................
Template Conservation 




 

 






 

     ....       
                 
    
        

  

  
 
  
Template Sequence  IGVVGKPNVGKSTFFSAATLANVG. . . . VTYAITDHPCKELGCSPNPQNYEYRNGLALIPVKXVDVAFLDDLRXASALIH
Template Known Secondary structure 
TTSS


....
S
SSS

S


SSS
TT




SSTT
S
Template Predicted Secondary structure 










....























Template SS confidence 















































































   3......10.........20...... ...30.........40.........50.........60.........70........
 
   97..100.........110.........120.........130.........140.........150.........160....
Predicted Secondary structure  ............


































Query SS confidence  . . . . . . . . . . . .



































































Query Sequence  . . . . . . . . . . . . EPQSCLDPSERVGRQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEGEC
Query Conservation  ............
    
 
  

   
                          

  


          
  



  
Alig confidence  ............























.........
















..















Template Conservation 

                

  
   
  

   
 .........                 ..       
     
  
Template Sequence  VVDATGKTDPEGQPTDYHDPVEDIEFLEREIDYWIY. . . . . . . . . GILSKGWDKFAKRIKLQ. . KIKLESAIAEHLSGIG
Template Known Secondary structure  TT

B
TTS
B
S


.........TTTSTTTSS..


TGGGT
Template Predicted Secondary structure 














.........



..






Template SS confidence 















































































   108.110.........120.........130.........140... ......150.........160 .........170......
 
   165....170.........180.........190.........200.........210........
Predicted Secondary structure 
















Query SS confidence 





















































Query Sequence  QKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHD
Query Conservation 


 




   
 








 

      
  

  
    
 


 



Alig confidence 

























......





















Template Conservation                           
......   
        

 
 
 

 
Template Sequence  VNENDVWEAXHKLNLPEDPTKWSQDD. . . . . . LLAFASEIRRVNKPXVIAANKA
Template Known Secondary structure 

TT

S
GGG

......S

G
Template Predicted Secondary structure 












......




Template SS confidence 





















































   177..180.........190.........200.. .......210.........220....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions