Job Description P0AAH4 Confidence 100.00% Date Thu Jan 5 11:12:56 GMT 2012 Rank 12 Aligned Residues 231 % Identity 25% Template c1vciA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sugar-binding transport atp-binding protein; PDBTitle: crystal structure of the atp-binding cassette of multisugar2 transporter from pyrococcus horikoshii ot3 complexed with3 atp Resolution 2.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	L	L	D	I	R	N	L	T	I	E	F	K	T	G	D	E	W	V	K	A	V	D	R	V	S	M	T	L	T	E	G	E	I	R	G	L	V	G	E	S	G	S	G	K	S	L	I	A	K	A	I	C	G	V	N	K	D	N	W	R	V	T	A	D	R	M	R	F	D	D	I	D	L	L	R	L	S	A
Query Conservation
Alig confidence															.	.	.	.																																											.	.	.	.
Template Conservation															.	.	.	.																																											.	.	.	.
Template Sequence		M	V	E	V	K	L	E	N	L	T	K	R	F	.	.	.	.	G	N	F	T	A	V	N	K	L	N	L	T	I	K	D	G	E	F	L	V	L	L	G	P	S	G	C	G	K	T	T	T	L	R	M	I	A	G	L	E	E	P	.	.	.	.	T	E	G	R	I	Y	F	G	D	R	D	V	T	Y	L	P	P
Template Known Secondary structure															.	.	.	.	T	T													T	T									T	T	S	S										T	S	S			.	.	.	.	S							T	T				T	T	S		G
Template Predicted Secondary structure															.	.	.	.																																											.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	R	R	K	L	V	G	H	N	V	S	M	I	F	Q	E	P	Q	S	C	L	D	P	S	E	R	V	G	R	Q	L	M	Q	N	I	P	A	W	T	Y	K	G	R	W	W	Q	R	F	G	W	R	K	R	R	A	I	E	L	L	H	R	V	G	I	K	D	H	K	D	A	M	R	S	F	P	Y	E	L	T
Query Conservation
Alig confidence				.	.	.	.	.	.										.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.																							.	.	.
Template Conservation				.	.	.	.	.	.										.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.																							.	.	.
Template Sequence		K	D	.	.	.	.	.	.	R	N	I	S	M	V	F	Q	H	.	.	.	.	.	.	.	.	M	T	V	Y	E	N	I	A	F	P	L	.	.	.	.	.	.	.	.	K	K	F	P	K	D	E	I	D	K	R	V	R	W	A	A	E	L	L	Q	I	E	.	.	.	E	L	L	N	R	Y	P	A	Q	L	S
Template Known Secondary structure		G	G	.	.	.	.	.	.	T	T								.	.	.	.	.	.	.	.									T	T		.	.	.	.	.	.	.	.																			T	T		G	.	.	.	G	G	T	T			G	G	G
Template Predicted Secondary structure				.	.	.	.	.	.										.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.																							.	.	.
Template SS confidence
		82	.							.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.									.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	E	C	Q	K	V	M	I	A	I	A	L	A	N	Q	P	R	L	L	I	A	D	E	P	T	N	S	M	E	P	T	T	Q	A	Q	I	F	R	L	L	T	R	L	N	Q	N	S	N	T	T	I	L	L	I	S	H	D	L	Q	M	L	S	Q	W	A	D	K	I	N	V	L	Y	C	G	Q	T	V	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	Q	R	Q	R	V	A	V	A	R	A	I	V	V	E	P	D	V	L	L	M	D	E	P	L	S	N	L	D	A	K	L	R	V	A	M	R	A	E	I	K	K	L	Q	Q	K	L	K	V	T	T	I	Y	V	T	H	D	Q	V	E	A	M	T	M	G	D	R	I	A	V	M	N	R	G	Q	L	L	Q	I
Template Known Secondary structure		S	S												T	T			S						S	T	T	T	T	S																												S										S							T	T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	S	K	E	L	V	T	M	P	H	H	P	Y	T	Q	A	L	I	R	A	I	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	P	T	E	V	Y	L	R	P	N	S	V	F	V	A	T	F	I	G	A	P	E	M
Template Known Secondary structure										S		S	B							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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