Job Description P0AAH4 Confidence 100.00% Date Thu Jan 5 11:12:56 GMT 2012 Rank 9 Aligned Residues 235 % Identity 23% Template c1q1bD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:maltose/maltodextrin transport atp-binding protein malk; PDBTitle: crystal structure of e. coli malk in the nucleotide-free form Resolution 2.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	I	R	N	L	T	I	E	F	K	T	G	D	E	W	V	K	A	V	D	R	V	S	M	T	L	T	E	G	E	I	R	G	L	V	G	E	S	G	S	G	K	S	L	I	A	K	A	I	C	G	V	N	K	D	N	W	R	V	T	A	D	R	M	R	F	D	D	I	D	L	L	R	L	S	A	R	E	R
Query Conservation
Alig confidence												.	.	.	.																																											.	.	.	.																				.
Template Conservation												.	.	.	.																																											.	.	.	.																				.
Template Sequence		V	Q	L	Q	N	V	T	K	A	W	.	.	.	.	G	E	V	V	V	S	K	D	I	N	L	D	I	H	E	G	E	F	V	V	F	V	G	P	S	G	C	G	K	S	T	L	L	R	M	I	A	G	L	E	T	I	.	.	.	.	T	S	G	D	L	F	I	G	E	K	R	M	N	D	T	P	P	A	E	.
Template Known Secondary structure												.	.	.	.	T	T													T	T								S	G	G	G	S								T	T	T	S	S			.	.	.	.		S	S					T	T				T	T			S	S	T	.
Template Predicted Secondary structure												.	.	.	.																																											.	.	.	.																				.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	L	V	G	H	N	V	S	M	I	F	Q	E	P	Q	S	C	L	D	P	S	E	R	V	G	R	Q	L	M	Q	N	I	P	A	W	T	Y	K	G	R	W	W	Q	R	F	G	W	R	K	R	R	A	I	E	L	L	H	R	V	G	I	K	D	H	K	D	A	M	R	S	F	P	Y	E	L	T	E	G	E
Query Conservation
Alig confidence		.	.	.	.	.											.	.																			.	.	.	.	.	.																							.	.	.
Template Conservation		.	.	.	.	.											.	.																			.	.	.	.	.	.																							.	.	.
Template Sequence		.	.	.	.	.	R	G	V	G	M	V	F	Q	S	Y	.	.	A	L	Y	P	H	L	S	V	A	E	N	M	S	F	G	L	K	L	.	.	.	.	.	.	A	G	A	K	K	E	V	I	N	Q	R	V	N	Q	V	A	E	V	L	Q	L	A	.	.	.	H	L	L	D	R	K	P	K	A	L	S	G	G	Q
Template Known Secondary structure		.	.	.	.	.	T					B		S			.	.				T	T	S						T	T	T	T	T	T	S	.	.	.	.	.	.	S	S	S	T	T	T	T	T	T	T					T	T	G	G	G	T		T	.	.	.	T		S	S					G	G	G	T	T	T
Template Predicted Secondary structure		.	.	.	.	.											.	.																			.	.	.	.	.	.																							.	.	.
Template SS confidence
							75	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.							.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Q	K	V	M	I	A	I	A	L	A	N	Q	P	R	L	L	I	A	D	E	P	T	N	S	M	E	P	T	T	Q	A	Q	I	F	R	L	L	T	R	L	N	Q	N	S	N	T	T	I	L	L	I	S	H	D	L	Q	M	L	S	Q	W	A	D	K	I	N	V	L	Y	C	G	Q	T	V	E	T	A	P	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Q	R	V	A	I	G	R	T	L	V	A	E	P	S	V	F	L	L	D	E	P	L	S	N	L	D	A	A	L	R	V	Q	M	R	I	E	I	S	R	L	H	K	R	L	G	R	T	M	I	Y	V	T	H	D	Q	V	E	A	M	T	L	A	D	K	I	V	V	L	D	A	G	R	V	A	Q	V	G	K	P
Template Known Secondary structure		S	S	S	S	T	T					T	T			S				B	S	S	T	T	T	T			T	T	T															T	T								S										S							T	T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	L	V	T	M	P	H	H	P	Y	T	Q	A	L	I	R	A	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	L	Y	H	Y	P	A	D	R	F	V	A	G	F	I	G	S	P	K
Template Known Secondary structure							S		S	B							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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