 |
Job Description | P0A948 | Confidence | 30.49% | Date | Thu Jan 5 11:09:22 GMT 2012 |
Rank | 152 | Aligned Residues | 138 |
% Identity | 12% | Template | c3iu2B_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:glycylpeptide n-tetradecanoyltransferase 1; |
PDBTitle: crystal structure of human type-i n-myristoyltransferase with bound2 myristoyl-coa and inhibitor ddd90096
|
Resolution | 1.73 Å |
|
 |
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | R | L | V | H | D | R | D | A | W | R | L | A | D | Y | Y | A | E | N | R | H | F | L | K | P | W | E | P | V | R | D | E | S | H | C | Y | P | S | G | W | Q | A | R | L | G | M | I | N | E | F | H | K | Q | G | S | A | F | Y | F | G | L | F | D | P | D | E | K | E | I | I | G | V | A | N | F | S | N | V | V | R |
Query Conservation |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |
|
|   |   |
|   |   |
|
|   | . | . | . | . | . | . |   |
|
|   |   |
|   |
|   |   |   |
|   |   |
|
|
|   |
|
|
|
| . | . | . | . | . | . |
|   |
|   |
|
|   |
|
|
|
|
|   |   |   |
|   |
|
|
|
|   |
|
|
|   |
|
|
|
Template Sequence |   |
L | R | P | M | E | T | K | D | I | P | V | V | H | Q | L | L | T | . |
. |
. |
. |
. |
. |
R | Y | L | K | Q | F | H | L | T | P | V | M | S | Q | E | E | V | E | H | W | F | Y | . |
. |
. |
. |
. |
. |
P | Q | E | N | I | I | D | T | F | V | V | E | N | A | N | G | E | V | T | D | F | L | S | F | Y | T | L | P | S |
Template Known Secondary structure |   |
 |  |  |
|
| G | G | G |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  | T | T | S | S |  |  |  |
|
|
|  |  |  |  |  |  |  |  | S | . | . | . | . | . | . |
| B | T | T | T |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |
|
|  |
Template Predicted Secondary structure |   |
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
338 | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . |
  |
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | |
. | . | . | . | . | . | . | . | 170 | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | S | F | H | A | C | Y | L | G | Y | S | I | G | Q | K | W | Q | G | K | G | L | M | F | E | A | L | T | A | A | I | R | Y | M | Q | R | T | Q | H | I | H | R | I | M | A | N | Y | M | P | H | N | K | R | S | G | D | L | L | A | R | L | G | F | . |
E | K | E | G | Y | A | K | D | Y | L | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|   |
|
| . |   |   |
|
|   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|   |
|
|   |   |   |   |
|
|
|
|
|
|   |
|   |   |
|   |   | . | . | . |
|
|   |   |
|
|
|   |   |
|
|
|   |
|   |
|
|
|
|
Template Sequence |   |
T | I | M | N | H | K | S | L | K | A | A | Y | S | F | Y | N | V | H | T | Q | T | P | L | L | D | L | M | S | D | A | L | V | L | A | K | M | K | G | F | D | V | F | N | A | L | D | L | M | E | N | K | T | . |
. |
. |
F | L | E | K | L | K | F | G | I | G | D | G | N | L | Q | Y | Y | L | Y |
Template Known Secondary structure |   |
 |  |
|
|
|
|
| B |
|  |  |  |  |
|
|
|  |  | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | S |
| T | T | G | G | G | . | . | . | T | T | T | T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
406 | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | |
|
|
. | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|