Job Description P0A948 Confidence 98.41% Date Thu Jan 5 11:09:22 GMT 2012 Rank 114 Aligned Residues 129 % Identity 16% Template c3fynA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:integron gene cassette protein hfx_cass3; PDBTitle: crystal structure from the mobile metagenome of cole2 harbour salt marsh: integron cassette protein hfx_cass3 Resolution 1.45 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	V	R	L	V	H	D	R	D	A	W	R	L	A	D	Y	Y	A	E	N	R	H	F	L	K	P	W	E	P	V	R	D	E	S	H	C	Y	P	S	G	W	Q	A	R	L	G	M	I	N	E	F	H	K	Q	G	S	A	F	Y	F	G	L	F	D	P	D	E	K	E	I	I	G	V	A	N	F	S	N	V
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Q	V	R	T	A	H	I	G	D	V	P	V	L	V	R	L	X	S	E	F	Y	Q	E	.	.	.	.	.	.	.	.	.	.	.	A	G	F	A	L	P	H	D	A	A	I	R	A	F	K	A	L	L	G	K	P	D	L	G	R	I	W	L	I	A	E	G	T	E	S	V	G	Y	I	V	L	T	L	G	F
Template Known Secondary structure		G	G						G	G	G															.	.	.	.	.	.	.	.	.	.	.	T	T																			G	G	G									T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.												.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		98	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		V	R	G	S	F	H	A	C	Y	L	G	.	.	Y	S	I	G	Q	K	W	Q	G	K	G	L	M	F	E	A	L	T	A	A	I	R	Y	M	Q	R	T	Q	H	I	H	R	I	M	A	N	Y	M	P	H	N	K	R	S	G	D	L	L	A	R	L	G	F	E	K	E	G	Y
Query Conservation													.	.
Alig confidence													.	.																												.										.	.	.	.	.	.	.	.
Template Conservation																																										.										.	.	.	.	.	.	.	.
Template Sequence		S	X	E	Y	G	G	L	R	G	F	V	D	D	F	F	V	R	P	N	A	R	G	K	G	L	G	A	A	A	L	Q	T	V	K	Q	G	C	C	D	L	.	G	V	R	A	L	L	V	E	T	.	.	.	.	.	.	.	.	G	V	Y	S	R	A	G	F	E	E	S	G	R
Template Known Secondary structure			T	T	T	T													G	G	G	T	T	S	S																T	.	T									.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																										.										.	.	.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions