Job Description P0A948 Confidence 99.82% Date Thu Jan 5 11:09:22 GMT 2012 Rank 31 Aligned Residues 152 % Identity 14% Template c3eo4A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein mj1062; PDBTitle: the crystal structure of a domain from methanocaldococcus jannaschii2 dsm 2661 Resolution 2.19 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	T	T	D	R	L	V	V	R	L	V	H	D	R	D	A	W	R	L	A	D	Y	Y	A	E	N	R	H	F	L	K	P	W	E	P	V	R	D	E	S	H	C	Y	P	S	G	W	Q	A	R	L	G	M	I	N	E	F	H	K	Q	G	S	A	F	Y	F	G	L	F	D	P	D	E	K	E	I	I	G	V
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.																											.	.	.
Template Conservation																																											.	.	.	.	.	.	.																											.	.	.
Template Sequence		N	C	K	K	S	K	I	I	I	R	Q	I	T	D	N	D	L	E	L	L	X	A	W	R	S	N	P	L	I	Y	K	F	F	Y	I	Q	K	E	P	L	K	.	.	.	.	.	.	.	W	E	E	H	Y	S	W	W	X	S	R	E	N	R	V	D	W	I	I	L	L	R	E	N	N	T	.	.	.	I	R	K
Template Known Secondary structure															G	G	G									T						T	T	S	T	T			S				.	.	.	.	.	.	.													S											T	T		.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.																											.	.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.								.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.				.	410	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	F	S	N	V	V	R	G	S	F	H	A	C	Y	L	G	Y	S	I	G	Q	K	W	Q	G	K	G	L	M	F	E	A	L	T	A	A	I	R	Y	M	Q	R	T	Q	H	I	H	R	I	M	A	N	Y	M	P	H	N	K	R	S	G	D	L	L	A	R	L	G	F	E	K	E	G	Y	A	K	D	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	S	V	N	V	S	Q	L	N	T	D	N	P	E	I	G	I	L	I	G	E	F	F	L	W	G	K	H	I	G	R	H	S	V	S	L	V	L	K	W	L	K	N	I	G	Y	K	K	A	H	A	R	I	L	E	N	N	I	R	S	I	K	L	F	E	S	L	G	F	K	K	T	K	K	G	R	E	N	E
Template Known Secondary structure										T	T	S	S	S									S	T	T	S	T	T	S	S																T	T										T	T											T	T								S	T	T
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
		172	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		496	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions