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20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
V | R | L | V | H | D | R | D | A | W | R | L | A | D | Y | Y | A | E | N | R | H | F | L | K | P | W | E | P | V | R | D | E | S | H | C | Y | P | S | G | W | Q | A | R | L | G | M | I | N | E | F | H | K | Q | G | S | A | F | Y | F | G | L | F | D | P | D | E | K | E | I | I | G | V | A | N | F | S | N | V | V | R |
Query Conservation |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
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|   |   | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | T | K | A | S | I | D | D | L | D | S | I | V | H | I | D | I | . |
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D | V | I | G | N | D | S | R | R | N | Y | I | K | H | S | I | D | E | . |
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G | R | C | V | I | V | K | E | D | N | S | I | S | G | F | L | T | Y | D | T | N | F | F | D |
Template Known Secondary structure |   |
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| G | G | G |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  | S | S | S | T | T |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | . | . | T |
|  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |
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Template SS confidence |   |
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  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
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. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
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. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
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100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
G | S | F | H | A | C | Y | L | G | Y | S | I | G | Q | K | W | Q | G | K | G | L | M | F | E | A | L | T | A | A | I | R | Y | M | Q | R | T | Q | H | I | H | R | I | M | A | N | Y | M | P | H | N | K | R | S | G | D | L | L | A | R | L | G | F | E | K | E | G | Y | A | K | D | Y | L | L | I | D | G | Q | W | R | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
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Alig confidence |   |
. | . | . |
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| . | . | . | . |
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| . | . |
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Template Conservation |   |
. | . | . |   |   |   |
|   |   |
|   |
|   |
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|   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |
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|   |   |   |
|   |   |   |   | . | . |   |   |   |   |   |   |   |   |
Template Sequence |   |
. |
. |
. |
C | T | F | L | S | L | I | I | V | S | P | T | K | R | R | R | G | Y | A | S | S | L | L | S | Y | X | L | S | H | S | P | T | . |
. |
. |
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Q | K | I | F | S | S | T | N | E | S | N | E | S | X | Q | K | V | F | N | A | N | G | F | I | R | S | G | I | V | E | N | . |
. |
L | D | E | G | D | P | E | I |
Template Known Secondary structure |   |
. | . | . |  |  |  |  |  |  |  |  |  |
| T | T |
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | . | . | . | . | S |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| S | . | . | S | S | T | T |
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|  |  |
Template Predicted Secondary structure |   |
. | . | . |
|
|  |  |  |  |  |  |  |
|  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
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|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
| . | . |
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Template SS confidence |   |
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  |   |
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63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
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. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
. | . | . | . | 130 | . | . | . |
  |
  |   |
180 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|  |
Query SS confidence |   |
|
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Query Sequence |   |
H | V | L | T | A | L | T | T |
Query Conservation |   |
  |   |   |   |   |
|
|   |
Alig confidence |   |
|
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Template Conservation |   |
|   |   |   |
|   |
|   |
Template Sequence |   |
I | F | Y | T | K | K | L | R |
Template Known Secondary structure |   |
 |  |  |  |  |
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Template Predicted Secondary structure |   |
 |  |  |  |  |
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Template SS confidence |   |
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  |   |
134 | . | . | . | . | . | 140 | . |
  |