Job Description P0A9P6 Confidence 99.88% Date Thu Jan 5 11:10:55 GMT 2012 Rank 98 Aligned Residues 178 % Identity 19% Template d1gkub1 SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Helicase-like "domain" of reverse gyrase Resolution 2.7

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	L	N	D	L	G	Y	E	K	P	S	P	I	Q	A	E	C	I	P	H	L	L	N	G	R	D	V	L	G	M	A	Q	T	G	S	G	K	T	A	A	F	S	L	P	L	L	Q	N	L	D	P	E	L	K	A	P	Q	I	L	V	L	A	P	T	R	E	L	A	V	Q	V	A	E	A	M	T	D	F
Query Conservation
Alig confidence																																																							.	.	.
Template Conservation																																																							.	.	.
Template Sequence		F	V	E	F	F	R	K	C	V	G	E	P	R	A	I	Q	K	M	W	A	K	R	I	L	R	K	E	S	F	A	A	T	A	P	T	G	V	G	K	T	S	F	G	L	A	M	S	L	F	L	A	L	K	.	.	.	G	K	R	C	Y	V	I	F	P	T	S	L	L	V	I	Q	A	A	E	T	I	R	K	Y
Template Known Secondary structure								T	T	T		S														T	T									T	T	S		S													T	T	.	.	.	S								S
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		98	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure							.	.	.																								.	.
Query SS confidence							.	.	.																								.	.
Query Sequence		S	K	H	M	R	.	.	.	G	V	N	V	V	A	L	Y	G	G	Q	R	Y	D	V	Q	L	R	A	L	R	Q	G	.	.	P	Q	I	V	V	G	T	P	G	R	L	L	D	H	L	K	R	G	T	L	D	L	S	K	L	S	G	L	V	L	D	E	A	D	E	M	L	R	M	G	F	I	E	D	V	E	T
Query Conservation							.	.	.																								.	.
Alig confidence							.	.	.																								.	.														.	.	.	.
Template Conservation																																																.	.	.	.
Template Sequence		A	E	K	A	G	V	G	T	E	N	L	I	G	Y	Y	H	G	R	I	P	K	R	E	K	E	N	F	M	Q	N	L	R	N	F	K	I	V	I	T	T	T	Q	F	L	S	K	.	.	.	.	H	Y	R	E	L	G	H	F	D	F	I	F	V	D	D	V	D	A	I	L	K	A	S	K	N	V	D	K	L	L
Template Known Secondary structure			T	T	T			S	G	G	G	S						S	S			S									S	G	G	G		S												.	.	.	.		S	T	T	S				S					S							T	S	T
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		173	.	.	.												.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	M	A	Q	.	.	.	.	.	.	.	.	.	.	.	I	P	E	G	H	Q	T	A	L	F	S	A	T	M	P	E	A	I	R	R	I	T	R	R	F	M
Query Conservation						.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	L	L	G	F	H	Y	D	L	K	T	K	S	W	V	G	E	A	R	G	C	L	M	V	S	T	A	T	A	K	K	G	K	K	A	E	L	F	R	Q	L
Template Known Secondary structure				T	T					T	T	T	T							S	S									S				T	T
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions