Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9P6
Confidence99.82%DateThu Jan 5 11:10:55 GMT 2012
Rank112Aligned Residues285
% Identity15%Templated1c4oa1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40... ......50.........60.........70.........80.........90........
Predicted Secondary structure 








.....














Query SS confidence 



















. . . . .






















































Query Sequence  LGYEKPSPIQAECIPHLLNG. . . . . RDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFS
Query Conservation   
       
   
  

 
.....   
  
 





    
  
  
         


 

  

 
    
  
 
Alig confidence 



















.....























......
























Template Conservation       
   
  

  
   
       

 
 





   
      ......    


 

 


 
    
    
Template Sequence  YRGPSPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTMAKVIEAL. . . . . . GRPALVLAPNKILAAQLAAEFRELF
Template Known Secondary structure 

S



TTTT
S
TTS
......T

SS
Template Predicted Secondary structure 
















......





Template SS confidence 















































































   5....10.........20.........30.........40.........50... ......60.........70........
 
   99100.........110.........120.........130.........140...... ...150.........160.........170.
Predicted Secondary structure 


















.....




..
Query SS confidence 















































. . . . .
























. .
Query Sequence  KHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLD. . . . . LSKLSGLVLDEADEMLRMGFIEDVE. .
Query Conservation       
 
    
          
     
 
 

  
          .....       
 

 
            ..
Alig confidence  ....











































.....
























..
Template Conservation  ....    
  
                         
   
   

        
  



 


 
            
Template Sequence  . . . . PENAVEYFISYYDYYQPEAYVPGKDLYIEKDASINPEIERLRHSTTRSLLTRRDVIVVASVSAIYGLGDPREYRAR
Template Known Secondary structure  ....TTS


GGGTS


GGGT



S


S
GGG
S




Template Predicted Secondary structure  ....


























Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.........140.........150....
 
   172.......180.........190.........200.........210.........220 .........230.......
Predicted Secondary structure 
























...........


...
Query SS confidence 
















































. . . . . . . . . . .
















. . .
Query Sequence  TIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDI. . . . . . . . . . . SQSYWTVWGMRKNEALV. . .
Query Conservation                                
     
           
...........           
   
 ...
Alig confidence 
















































...........
















...
Template Conservation   
    
 

   
    
      
  

      
       

 

        
 
        

 
        
Template Sequence  NLVGFVLFPATHYLSPEGLEEILKEIEKELWERVRYFEERGEVLYAQRLKERTLYDLEMLRVMGTCPGVENYARYFTGKA
Template Known Secondary structure 
B



B

S
S



SSTT
S

TTGGGGT

Template Predicted Secondary structure 





















Template SS confidence 















































































   155....160.........170.........180.........190.........200.........210.........220.........230....
 
   238.240.........250.........260. ........270.........280........ .290......... 300.....
Predicted Secondary structure  ......






...








..



.
Query SS confidence  . . . . . .























. . .


























. .










.





Query Sequence  . . . . . . RFLEAEDFDAAIIFVRTKNATLEV. . . AEALERNGYNSAALNGDMNQALREQTL. . ERLKDGRLDIL. IATDVA
Query Conservation  ......  
        


  
       ...   
          
       
    ..  
  
   

.


  
Alig confidence  ......























...


























..










.





Template Conservation        

 

     

  

                  
  
   
  


  


 
  


         
 

  
Template Sequence  PGEPPYTLLDYFPEDFLVFLDESHVTVPQLQGMYRGDYARKKTLVDYGFRLPSALDNRPLRFEEFLERVSQVVFVSATPG
Template Known Secondary structure  TTS



GGGGS
TT
TTTSS
GGGGGSS


T
SSS

Template Predicted Secondary structure 
























Template SS confidence 















































































   313......320.........330.........340.........350.........360.........370.........380.........390..
 
   306...310... .....
Predicted Secondary structure 




..

Query SS confidence 







. .




Query Sequence  ARGLDVER. . ISLVV
Query Conservation    




 ..
  

Alig confidence 







..




Template Conservation    

      
    
Template Sequence  PFELAHSGRVVEQII
Template Known Secondary structure 
S
S
Template Predicted Secondary structure 






Template SS confidence 














   393......400.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions