 |
Job Description | P0A9P6 | Confidence | 91.10% | Date | Thu Jan 5 11:10:55 GMT 2012 |
Rank | 261 | Aligned Residues | 75 |
% Identity | 17% | Template | c3b9pA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:cg5977-pa, isoform a; |
PDBTitle: spastin
|
Resolution | 2.70 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | F | E | T | T | F | A | D | L | G | L | K | A | P | I | L | E | A | L | N | D | L | G | Y | E | K | P | S | P | I | Q | A | E | C | I | P | H | L | L | N | G | R | D | V | L | G | M | A | Q | T | G | S | G | K | T | A | A | F | S | L | P | L | L | Q | N | L | D | P | E | L | K | A | P | Q | I | L | V | L | A |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|   |   |
|   |   |   | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
| . | . | . | . | . | . |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | G | A | K | V | E | W | T | D | I | A | G | Q | D | V | A | K | Q | A | L | Q | E | M | . |
V | I | L | P | S | V | R | P | E | L | F | T | G | L | R | A | P | A | K | G | L | L | L | F | G | P | P | G | N | G | K | T | . |
. |
. |
. |
. |
. |
L | L | A | R | A | V | A | T | E | C | S | A | T | F | L | N | I | S |
Template Known Secondary structure |   |
| S | S |
|
|
| G | G | G | S |
|
|
|  |  |  |  |  |  |  |  |  |  | . | T |  |  |  |  |  |
| G | G | G | S |
| G | G | G |
|
|
| S |  |  |  |  |  | S | S | S | S | S |
|  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
476 | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | |
. | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . |
  |
  |   |
82 | . |
Predicted Secondary structure |   |
|  |
Query SS confidence |   |
|
|
Query Sequence |   |
P | T |
Query Conservation |   |
|
|
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
A | A |
Template Known Secondary structure |   |
S | T |
Template Predicted Secondary structure |   |
|
|
Template SS confidence |   |
|
|
  |   |
549 | 550 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|