Job Description P0A9P6 Confidence 99.93% Date Thu Jan 5 11:10:55 GMT 2012 Rank 88 Aligned Residues 142 % Identity 34% Template c2p6nA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase ddx41; PDBTitle: human dead-box rna helicase ddx41, helicase domain Resolution 2.60 Å

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		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	S	Q	S	Y	W	T	V	W	G	M	R	K	N	E	A	L	V	R	F	L	E	A	E	D	F	D	A	A	I	I	F	V	R	T	K	N	A	T	L	E	V	A	E	A	L	E	R	N	G	Y	N	S	A	A	L	N	G	D	M	N	Q	A	L	R	E	Q	T	L	E	R	L	K	D	G	R	L	D	I
Query Conservation
Alig confidence																													.
Template Conservation																													.
Template Sequence		D	V	I	Q	E	V	E	Y	V	K	E	E	A	K	M	V	Y	L	L	E	C	L	Q	K	T	P	P	.	P	V	L	I	F	A	E	K	K	A	D	V	D	A	I	H	E	Y	L	L	L	K	G	V	E	A	V	A	I	H	G	G	K	D	Q	E	E	R	T	K	A	I	E	A	F	R	E	G	K	K	D	V
Template Known Secondary structure			S									G	G	G										T	T	S		S	.							S																T								T	T	S															T	S		S
Template Predicted Secondary structure																													.
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.		.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		L	I	A	T	D	V	A	A	R	G	L	D	V	E	R	I	S	L	V	V	N	Y	D	I	P	M	D	S	E	S	Y	V	H	R	I	G	R	T	G	R	A	G	R	A	G	R	A	L	L	F	V	E	N	R	.	E	R	R	L	L	R	N	I	E	R	T	M
Query Conservation																																																								.
Alig confidence																																													.	.	.									.
Template Conservation																																													.	.	.
Template Sequence		L	V	A	T	D	V	A	S	K	G	L	D	F	P	A	I	Q	H	V	I	N	Y	D	M	P	E	E	I	E	N	Y	V	H	R	I	G	R	T	G	C	T	G	I	.	.	.	A	T	T	F	I	N	K	A	C	D	E	S	V	L	M	D	L	K	A	L	L
Template Known Secondary structure										T	T							S					S	S			S	S									T	T	S						.	.	.							T	T	S
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.				.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions