Job Description P0A9P6 Confidence 96.96% Date Thu Jan 5 11:10:55 GMT 2012 Rank 156 Aligned Residues 136 % Identity 19% Template c2cnwF_ PDB info PDB header:signal recognition Chain: F: PDB Molecule:cell division protein ftsy; PDBTitle: gdpalf4 complex of the srp gtpases ffh and ftsy Resolution 2.39 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.																																								.
Query SS confidence																														.	.	.	.	.	.																																								.
Query Sequence		A	P	I	L	E	A	L	N	D	L	G	Y	E	K	P	S	P	I	Q	A	E	C	I	P	H	L	L	N	.	.	.	.	.	.	G	R	D	V	L	G	M	A	Q	T	G	S	G	K	T	A	A	F	S	L	P	L	L	Q	N	L	D	P	E	L	K	A	P	Q	I	L	V	L	A	.	P	T	R	E	L	A
Query Conservation																														.	.	.	.	.	.																																								.
Alig confidence																														.	.	.	.	.	.																		.	.																					.
Template Conservation																																																					.	.
Template Sequence		E	E	I	L	Q	E	V	R	A	S	G	R	K	D	L	K	E	A	V	K	E	K	L	V	G	M	L	E	P	P	V	E	P	K	G	R	V	V	L	V	V	G	V	N	G	V	G	K	T	T	T	.	.	I	A	K	L	G	R	Y	Y	Q	N	L	G	K	K	V	M	F	C	A	G	D	T	F	R	A	A	G
Template Known Secondary structure														S		S												T							S	S	S							S	T	T	S	S					.	.										T	T	T											S	S	T	T
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120							.	.	.	.	.	.	.	.	.	130	.	.	.														.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	V	A	E	A	M	T	D	F	S	K	H	M	R	G	V	N	V	V	A	L	Y	G	G	Q	R	Y	D	V	Q	L	R	.	.	.	.	.	.	A	L	R	Q	G	P	Q	I	V	V	G	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	L	L	D	H	L	K	R	G	T	L	D	L	S
Query Conservation																																			.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.																			.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.
Template Sequence		G	T	Q	L	S	E	W	G	K	R	L	.	.	.	.	S	I	P	V	I	Q	G	P	E	G	T	D	P	A	A	L	A	Y	D	A	V	Q	A	M	K	A	R	G	Y	D	L	L	F	V	D	T	A	G	R	L	H	T	K	H	N	L	M	E	E	L	K	K	V	K	R	A	I	A	K	A	D	P	E	E	P
Template Known Secondary structure													.	.	.	.	T								T	T	S																T	T		S											T	T																				T	T
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		149	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	S	G	L	V	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	V	W	L	V	L	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions