Job Description P0A9P6 Confidence 91.03% Date Thu Jan 5 11:10:55 GMT 2012 Rank 263 Aligned Residues 67 % Identity 25% Template c1nsfA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:n-ethylmaleimide sensitive factor; PDBTitle: d2 hexamerization domain of n-ethylmaleimide sensitive factor (nsf) Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.													.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	L	K	A	P	I	L	E	A	L	N	D	L	G	Y	E	K	P	S	P	I	Q	A	E	C	I	P	H	L	L	N	.	.	.	.	.	.	.	.	.	.	.	.	G	R	D	V	L	G	M	A	Q	T	G	S	G	K	T	A	A	F	S	L	P	L	L	Q	N	L	D	P	E	L	K	A	P	Q	I	L
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.
Template Sequence		F	G	T	N	Q	E	D	Y	A	S	Y	I	M	N	G	I	I	K	W	G	D	P	V	T	R	V	L	D	D	G	E	L	L	V	Q	Q	T	K	N	S	D	R	T	P	L	V	S	V	L	L	E	G	P	P	H	S	G	K	T	A	.	.	.	.	.	L	A	A	K	I	A	E	E	S	N	F	P	F	I	K
Template Known Secondary structure		T	T		B				T	T	T	T		T	T						S																					S	S		S									S	T	T	S	S				.	.	.	.	.												S
Template Predicted Secondary structure																																																														.	.	.	.	.
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.						.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
		79	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	C	S	P
Template Known Secondary structure					G
Template Predicted Secondary structure
Template SS confidence
		567	.	.	570

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions