 |
Job Description | P00350 | Confidence | 99.17% | Date | Thu Jan 5 10:56:33 GMT 2012 |
Rank | 95 | Aligned Residues | 101 |
% Identity | 17% | Template | d3cuma1 |
SCOP info | 6-phosphogluconate dehydrogenase C-terminal domain-like
| 6-phosphogluconate dehydrogenase C-terminal domain-like
| Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
|
Resolution | 2.20 |
|
 |
  |   |
175 | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 240 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | G | A | G | H | Y | V | K | M | V | H | N | G | I | E | Y | G | D | M | Q | L | I | A | E | A | Y | S | L | L | K | G | G | L | N | L | T | N | E | E | L | A | Q | T | F | T | E | W | N | N | G | E | L | S | S | Y | L | I | D | I | T | K | . |
. |
. |
. |
. |
. |
. |
D | I | F | T | K | K | D | E | D | G | N |
Query Conservation |   |
  |   |
|
|
|
|   |
|
|
|
|
|
|   |
|
|
|   |   |
|
|   |
|
|
|
|   |   |
|
|   |   |   |   |
|
|   |   |   |   |
|
|   |
|
|   |   |
|
|   |
|   |
|   |
|
|
|   |
|
|
|   | . | . | . | . | . | . | . |   |   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|
| . |   |   |   |
|
|
|   |   |   |   |   |   |
| . | . | . |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | D | G | A | G | Q | V | A | K | V | C | N | N | Q | L | L | A | V | L | X | I | G | T | A | E | A | X | A | L | G | . |
V | A | N | G | L | E | A | K | V | L | A | E | I | . |
. |
. |
X | R | R | S | S | G | G | N | W | A | L | E | V | Y | N | P | W | P | G | V | X | E | N | A | P | A | S | R | D | Y | S | G | G |
Template Known Secondary structure |   |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  | T | T |
|
|  |  |  |  |  |  |  | . | . | . |  |  | T | S | T | T |
|
|  |  |  |  |  |
|
|
| S | T | T | S | S | T | T | S | G | G | G | G | T | T |
| S | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|  |  |  |  |  |  |  | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
163 | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | |
. | . | . | . | . | . | . | 200 | . | . | . | . | . | |
|
|
. | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
  |
  |   |
248 | . | 250 | . | . | |
. | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  | . |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | L | V | D | V | . |
I | L | D | E | A | A | N | K | G | T | G | K | W | T | S | Q | S | A | L | D | L | G | E | P | L | S | L | I | T | E | S | V | F | A |
Query Conservation |   |
  |   |   |   |   | . |
|   |
|   |   |   |   |
|
|
|
|   |
|
|   |   |   |
|   |   |
|
|
|
|   |
|   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |
|
|
| . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
Template Sequence |   |
F | X | A | Q | L | X | A | K | D | L | . |
. |
. |
. |
. |
. |
. |
G | L | A | Q | E | A | A | Q | A | S | A | S | S | T | P | X | G | S | L | A | L | S | L |
Template Known Secondary structure |   |
S | B |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
239 | 240 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|