Job Description P00350 Confidence 96.93% Date Thu Jan 5 10:56:33 GMT 2012 Rank 339 Aligned Residues 125 % Identity 15% Template c3uagA_ PDB info PDB header:ligase Chain: A: PDB Molecule:protein (udp-n-acetylmuramoyl-l-alanine:d- PDBTitle: udp-n-acetylmuramoyl-l-alanine:d-glutamate ligase Resolution 1.77 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.
Predicted Secondary structure																																			.																																								.	.
Query SS confidence																																			.																																								.	.
Query Sequence		S	K	Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	T	V	S	I	F	N	R	.	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	.	.	V	K	A	G	A
Query Conservation																																			.																																								.	.
Alig confidence																																			.																						.	.	.	.	.														.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		Q	G	K	N	V	V	I	I	G	L	G	L	T	G	L	S	C	V	D	F	F	L	A	R	G	V	T	P	R	V	M	D	T	R	M	T	P	P	G	L	D	K	L	P	E	A	V	E	R	H	T	G	S	L	N	.	.	.	.	.	D	E	W	L	M	A	A	D	L	I	V	A	S	P	G	I	A	L	A	H
Template Known Secondary structure		T	T									S												T	T	T								S	S	S	S		T	T	G	G	G	S		T	T	S					S	S			.	.	.	.	.					T	T		S						T	T	S		T	T	S
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.											.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence										.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		G	T	D	A	A	I	D	S	.	.	.	.	.	.	.	.	.	.	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	.	R	N	R	E	L	S	A	E	G	F	N	F	I	G	T	G	V	S	G	G	E
Query Conservation										.	.	.	.	.	.	.	.	.	.																									.
Alig confidence										.	.	.	.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		P	S	L	S	A	A	A	D	A	G	I	E	I	V	G	D	I	E	L	F	C	R	E	A	Q	A	P	I	V	A	I	T	G	S	N	G	K	S	T	V	T	T	L	V	G	E	M	A	K	A	A	G	V	N	V	G	V	G	G	N	I	G	L	P
Template Known Secondary structure										T	T																S								S	S																T	T								T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions