Job Description P00350 Confidence 97.14% Date Thu Jan 5 10:56:33 GMT 2012 Rank 317 Aligned Residues 111 % Identity 16% Template c3u62A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima Resolution 1.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		K	Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	.	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V	K	A	G	A	G	T	D
Query Conservation																											.
Alig confidence																											.																					.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.
Template Sequence		K	E	P	V	V	V	V	G	A	G	G	A	A	R	A	V	I	Y	A	L	L	Q	M	G	V	K	D	I	W	V	V	N	R	T	I	E	R	A	K	A	L	D	F	P	V	K	.	.	.	.	.	.	I	F	S	L	D	Q	L	D	E	V	V	K	K	A	K	S	L	F	N	T	T	S	V	G	M	K	G	E
Template Known Secondary structure			S	S							S													T	T									S							T			S	S			.	.	.	.	.	.				G	G	G							T		S						S	S	T	T	T	T	S
Template Predicted Secondary structure																																																.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.							.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		A	A	I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	.	F	I	G
Query Conservation																																										.
Alig confidence			.																						.	.	.	.														.
Template Conservation			.																						.	.	.	.
Template Sequence		E	.	L	P	V	S	D	D	S	L	K	N	L	S	L	V	Y	D	V	I	Y	F	D	.	.	.	.	T	P	L	V	V	K	A	R	K	L	G	V	K	H	I	I	K
Template Known Secondary structure			.		S							T	T		S						S	S	S		.	.	.	.											T		S
Template Predicted Secondary structure			.																						.	.	.	.
Template SS confidence
		182		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions