Job Description P00350 Confidence 100.00% Date Thu Jan 5 10:56:33 GMT 2012 Rank 16 Aligned Residues 277 % Identity 14% Template c3qsgA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nad-binding phosphogluconate dehydrogenase-like protein; PDBTitle: crystal structure of nad-binding phosphogluconate dehydrogenase-like2 protein from alicyclobacillus acidocaldarius Resolution 1.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	T	.	.	.	V	S	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V	K	A	G	A	G	T	D
Query Conservation																										.	.	.
Alig confidence																										.	.	.																				.	.	.	.															.	.	.
Template Conservation																																																.	.	.	.															.	.	.
Template Sequence		K	L	G	F	I	G	F	G	E	A	A	S	A	I	A	S	G	L	R	Q	A	G	A	I	D	X	A	A	Y	D	A	A	S	A	E	S	W	R	P	R	A	E	E	L	G	V	.	.	.	.	S	C	K	A	S	V	A	E	V	A	G	E	C	D	.	.	.	V	I	F	S	L	V	T	A	Q	A	A	L	E
Template Known Secondary structure									S														S									S	S												T	T		.	.	.	.				S										S	.	.	.						S		T	T	T
Template Predicted Secondary structure																																																.	.	.	.															.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.																				.
Query SS confidence																																							.	.																				.
Query Sequence		A	A	I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	.	.	G	F	N	F	I	G	T	G	V	S	G	G	E	E	G	A	L	K	G	.	P	S	I	M	P	G	G	Q	K	E	A	Y	E	L	V	A	P	I	L	T	K
Query Conservation																																							.	.																				.
Alig confidence				.																																			.	.																				.										.	.	.
Template Conservation				.																																																																		.	.	.
Template Sequence		V	A	.	Q	Q	A	G	P	H	L	C	E	G	A	L	Y	A	D	F	T	S	C	S	P	A	V	K	R	A	I	G	D	V	I	S	R	H	R	P	S	A	Q	Y	A	A	V	A	V	X	S	A	V	K	P	H	G	H	R	V	P	L	V	V	D	G	D	G	A	.	.	.	R	R	F	Q	A	A	F	T	L
Template Known Secondary structure				.				G	G	G			T	T																										T	T										S		S	T	T	T	G	G	G	S						S	T	T		.	.	.									T
Template Predicted Secondary structure				.																																																																		.	.	.
Template SS confidence
		75	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		I	A	A	V	A	E	D	G	E	P	C	V	T	Y	I	G	A	.	D	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	A	E	A	Y	S	L	L	K	G	G	L	N	L	T	N	E	E	L	A	Q	T	F	T	E	W	N	N	G	E	L	S	S	Y	L	I	D	I	T	K	D
Query Conservation																			.
Alig confidence						.	.	.	.	.	.	.							.																														.
Template Conservation						.	.	.	.	.	.	.																																					.
Template Sequence		Y	G	C	R	.	.	.	.	.	.	.	I	E	V	L	D	G	E	V	G	G	A	A	L	L	K	X	C	R	S	A	V	L	K	G	L	E	A	L	F	L	E	A	L	A	A	A	.	E	K	X	G	L	A	D	R	V	L	A	S	L	D	A	S	F	P	E	H	H	L	R	D	L	A	L	Y	L	V	E	R
Template Known Secondary structure		T	T			.	.	.	.	.	.	.						S	S	T	T																												.		T	T	T													S	G	G	G	T
Template Predicted Secondary structure						.	.	.	.	.	.	.																																					.
Template SS confidence
		151	.	.	.								.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	T	K	K	D	E	D	G	N	Y	L	V	D	V	I	L	D	E	A	A	N	K	G	T	G	K	W	T	S	Q	S	A	L	D	L	G	E	P	L	S	L	I	T	E	S	V	F	A	R	Y	I	S	S	L	K	D	Q	R	V	A	A	S	K	V	L	S	G	P	Q	A	Q	P	A	G	D	K	A	E	F
Query Conservation
Alig confidence				.	.	.	.	.	.	.											.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.											.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	.	.	.	.	.	.	.	E	H	A	D	R	R	A	H	E	L	.	.	.	.	.	.	.	G	E	V	A	A	T	L	C	S	V	G	V	E	P	L	V	A	E	A	G	Y	R	R	L	T	R	V	A	Q	V	R	A	.	.	.	.	.	.	.	.	.	.	A	L	K	Q	R	P	G	D	V	R	A	W
Template Known Secondary structure				.	.	.	.	.	.	.											.	.	.	.	.	.	.										T	T																						.	.	.	.	.	.	.	.	.	.			S	S			S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.											.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		223	.								.	.	.	.	.	230	.	.	.	.								.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.											.	.	.	270	.	.	.	.	.	.	.	.
		318	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	K	V	R	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	S	L	A	N	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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