Job Description P00350 Confidence 99.92% Date Thu Jan 5 10:56:33 GMT 2012 Rank 35 Aligned Residues 210 % Identity 13% Template c3plnA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: crystal structure of klebsiella pneumoniae udp-glucose 6-dehydrogenase2 complexed with udp-glucose Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.															.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																									.																																																							.	.
Template Sequence		E	F	M	K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	V	L	I	A	Q	.	N	H	E	V	V	A	L	D	I	V	Q	A	K	V	D	M	L	N	Q	K	I	S	P	I	V	D	K	E	I	Q	E	Y	L	A	E	K	P	L	N	F	R	A	T	T	D	K	H	D	A	Y	R	N	A	D	.	.
Template Known Secondary structure		T	S									S												T	.	T	S							S										T	T			S	S												S								S							T	T		S	.	.
Template Predicted Secondary structure																									.																																																							.	.
Template SS confidence
		998	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020		.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.										.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.																																																									.
Query SS confidence																.	.	.	.	.	.	.	.	.																																																									.
Query Sequence		R	R	I	L	L	M	V	K	A	G	A	G	T	D	.	.	.	.	.	.	.	.	.	A	A	I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I	G	T	G	V	S	G	G	E	E	G	A	L	K	G	.
Query Conservation																.	.	.	.	.	.	.	.	.																																																									.
Alig confidence		.														.	.	.	.	.	.	.	.	.																																																									.
Template Conservation		.
Template Sequence		.	Y	V	I	I	A	T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	T	V	E	A	V	I	R	D	V	T	E	I	N	P	N	A	V	M	I	I	K	S	T	I	P	V	G	F	T	R	D	I	K	E	R	L	G	I	D	N	V	I	F	S	P	E	F	L	R	E	G	R	A	L	Y	D	N	L	H
Template Known Secondary structure		.												T	T	T	T																			T	T	S						S				T	T										T													T	T	S							S
Template Predicted Secondary structure		.
Template SS confidence
			76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		138	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		P	S	.	I	M	P	G	G	Q	K	E	A	Y	E	L	V	A	P	I	L	T	K	I	A	A	V	A	E	D	G	E	P	C	V	T	Y	I	G	A	D	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	A	E	A	Y	S	L	L	K	G	G	L	N	L	T	N	E	E	L	A
Query Conservation				.
Alig confidence				.																											.	.	.	.																																				.
Template Conservation																															.	.	.	.																																				.
Template Sequence		P	S	R	I	V	I	G	E	R	S	A	R	A	E	R	F	A	D	L	L	K	E	G	A	I	K	Q	D	I	.	.	.	.	P	T	L	F	T	D	S	T	E	A	E	A	I	K	L	F	A	N	T	Y	L	A	L	R	V	A	Y	F	N	E	L	D	S	Y	A	.	E	S	Q	G	L	N	S	K	Q	I	I
Template Known Secondary structure			S					S	S		S															S	S	S	S		.	.	.	.																																				.				T
Template Predicted Secondary structure																															.	.	.	.																																				.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.
		217	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	F	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	V	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions