Job Description P00350 Confidence 97.55% Date Thu Jan 5 10:56:33 GMT 2012
Rank 283 Aligned Residues 118
% Identity 11% Template c3pgjB_
PDB info
PDB header: oxidoreductaseChain: B: PDB Molecule: shikimate dehydrogenase;
PDBTitle: 2.49 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. n169613 in complex with shikimate
Resolution 2.49 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
2 . . . . . . . 10 . . . . . . . . . 20 . . . . . . .
. . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
S K Q Q I G V V G M A V M G R N L A L N I E S R G Y .
T V S I F N R S R E K T E E V I A E N P G K K L V P Y Y T V K E F V E S L E T P R R I L L M V K A G A G T
Query Conservation  
                    .                                                                  
Alig confidence  
. . . .
Template Conservation  
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Template Sequence  
K G A T I L L I G A G G A A R G V L K P L L D Q Q P A S I T V T N R T F A K A E Q L A E L V A A Y G E V K A Q A F E Q .
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L K Q S Y D V I I N S T S A S L D G
Template Known Secondary structure  
T T S T T T S S S T T S G G G . . . S S S S T T T T T
Template Predicted Secondary structure  
. . .
Template SS confidence  
   
122 . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180
. . . . . . . . . 190 . . . . . . . .
 
   
81 . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
D A A I D S L K P Y L D K G D I I I D G G N T F F Q D T I R R N R E L S A E G F N F I G
Query Conservation  
                                                 
Alig confidence  
. .
Template Conservation  
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Template Sequence  
E L P .
A I D P V I F S S R S V C Y D M .
M Y G K G Y T V F N Q W A R Q H G C A Q A I D
Template Known Secondary structure  
. G G G T T S . S S T T S
Template Predicted Secondary structure  
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Template SS confidence  
   
199 200 .
. . . . . . . . 210 . . . . . . .
. . 220 . . . . . . . . . 230 . . . . . . . . . 240
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]