Job Description P00350 Confidence 99.95% Date Thu Jan 5 10:56:33 GMT 2012 Rank 27 Aligned Residues 205 % Identity 17% Template c3ojlA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:cap5o; PDBTitle: native structure of the udp-n-acetyl-mannosamine dehydrogenase cap5o2 from staphylococcus aureus Resolution 2.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.													.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	.	.	.	.	.	.	.	.	.	.	.	.	S	L	E	T	P	R	R	I	L
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.
Template Sequence		S	K	L	T	V	V	G	L	G	Y	I	G	L	P	T	S	I	M	F	A	K	H	G	V	D	V	L	G	V	D	I	N	Q	Q	T	I	D	K	L	Q	N	G	Q	I	S	.	.	.	I	E	E	P	G	L	Q	E	V	Y	E	E	V	L	S	S	G	K	L	K	V	S	T	T	P	E	A	S	D	V	F	I
Template Known Secondary structure										S	T	T											T	T								S										T	T			S	.	.	.	S			T	T											T	T	S					S	S					S
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		72	.	.	.	.	.												.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.										.	.	.	130	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Query Sequence		L	M	V	K	A	G	.	.	.	.	.	.	.	.	.	.	.	A	G	T	D	A	A	I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I	G	T	G	.	.	.	.	.	.	.	.	.	V	S	G	G	E
Query Conservation								.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	V	P	T	P	N	N	D	D	Q	Y	R	S	C	D	I	S	L	V	M	R	A	L	D	S	I	L	P	F	L	K	K	G	N	T	I	I	V	E	S	T	I	A	P	K	T	M	D	D	F	V	K	P	V	I	E	N	L	G	F	T	I	G	E	D	I	Y	L	V	H	C	P	E	R	V	L	P	G	K
Template Known Secondary structure								B		S	S	T	T			B													G	G	G			T	T							S				T	T					T							T	T	T			B	T	T	T	B											S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		132	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		E	G	A	L	K	G	.	.	P	S	I	M	P	G	G	Q	K	E	A	Y	E	L	V	A	P	I	L	T	K	I	A	A	V	A	E	D	G	E	P	C	V	T	Y	I	G	A	D	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	A	E	A	Y	S	L	L	K	G	G	L	N
Query Conservation								.	.
Alig confidence								.	.																										.	.	.	.	.	.	.																																				.
Template Conservation																																			.	.	.	.	.	.	.																																				.
Template Sequence		I	L	E	E	L	V	H	N	N	R	I	I	G	G	V	T	K	A	C	I	E	A	G	K	R	V	Y	R	T	F	V	Q	G	.	.	.	.	.	.	.	E	M	I	E	T	D	A	R	T	A	E	M	S	K	L	M	E	N	T	Y	R	D	V	N	I	A	L	A	N	E	L	T	K	I	C	.	N	N	L	N
Template Known Secondary structure									S							S	S												T	T	T			S	.	.	.	.	.	.	.																																				.			T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.																																				.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.
		210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	N	E	E	L	A	Q	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	V	L	D	V	I	E	M	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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