Job Description P00350 Confidence 96.70% Date Thu Jan 5 10:56:33 GMT 2012 Rank 361 Aligned Residues 120 % Identity 9% Template c3oa0B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:lipopolysaccaride biosynthesis protein wbpb; PDBTitle: crystal structure of the wlba (wbpb) dehydrogenase from thermus2 thermophilus in complex with nad and udp-glcnaca Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure													.																	.																																						.	.	.	.
Query SS confidence													.																	.																																						.	.	.	.
Query Sequence		M	S	K	Q	Q	I	G	V	V	G	M	.	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	.	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	.	.	.	.	E	T	P	R	R	I	L	L	M	V
Query Conservation													.																	.																																						.	.	.	.
Alig confidence					.	.							.																	.																																						.	.	.	.
Template Conservation					.	.
Template Sequence		M	T	R	.	.	F	A	L	T	G	L	A	G	Y	I	A	P	R	H	L	K	A	I	K	E	V	G	G	V	L	V	A	S	L	D	P	A	T	N	V	G	L	V	D	S	F	F	P	E	A	E	F	F	T	E	P	E	A	F	E	A	Y	L	E	D	L	R	D	R	G	E	G	V	D	Y	L	S	I	A	S
Template Known Secondary structure					.	.						T	T	S	S	S											T	T									S	S				G	G	G	G	G	T		T	T					S															T	T				S						S
Template Predicted Secondary structure					.	.
Template SS confidence
		1	.	.			.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		K	A	G	A	G	T	D	A	A	I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	.	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I	G	T
Query Conservation																													.
Alig confidence																				.	.	.							.
Template Conservation																				.	.	.
Template Sequence		P	N	H	L	H	Y	P	Q	I	R	M	A	L	R	L	G	A	N	.	.	.	A	L	S	E	K	P	L	V	L	W	P	E	E	I	A	R	L	K	E	L	E	A	R	T	G	R	R	V	Y	T	V
Template Known Secondary structure			G	G	G											T	T			.	.	.					S	S	S		S																T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions