Job Description P00350 Confidence 100.00% Date Thu Jan 5 10:56:33 GMT 2012 Rank 15 Aligned Residues 263 % Identity 15% Template c3l6dB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of putative oxidoreductase from pseudomonas putida2 kt2440 Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	K	Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V	K	A	G	A	G	T
Query Conservation
Alig confidence			.																																														.	.	.	.															.	.	.
Template Conservation			.																																														.	.	.	.															.	.	.
Template Sequence		F	.	E	F	D	V	S	V	I	G	L	G	A	X	G	T	I	X	A	Q	V	L	L	K	Q	G	K	R	V	A	I	W	N	R	S	P	G	K	A	A	A	L	V	A	A	G	A	.	.	.	.	H	L	C	E	S	V	K	A	A	L	S	A	S	P	.	.	.	A	T	I	F	V	L	L	D	N	H	A	T
Template Known Secondary structure			.	S		S							S													T	T								S											T	T		.	.	.	.				S	S								S	S	.	.	.							S	S
Template Predicted Secondary structure			.																																														.	.	.	.															.	.	.
Template SS confidence
		8		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.
		81	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure							.																																																					.
Query SS confidence							.																																																					.
Query Sequence		D	A	A	I	D	.	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I	G	T	G	V	S	G	G	E	E	G	A	L	K	G	.	P	S	I	M	P	G	G	Q	K	E	A	Y	E	L	V	A	P	I	L	T	K
Query Conservation							.																																																					.
Alig confidence							.																																																					.
Template Conservation
Template Sequence		H	E	V	L	G	X	P	G	V	A	R	A	L	A	H	R	T	I	V	D	Y	T	T	N	A	Q	D	E	G	L	A	L	Q	G	L	V	N	Q	A	G	G	H	Y	V	K	G	X	I	V	A	Y	P	R	N	V	G	H	R	E	S	H	S	I	H	T	G	D	R	E	A	F	E	Q	H	R	A	L	L	E	G
Template Known Secondary structure							S	T	T						T	T							S																	T	T										S		G	G	G	T	T		T	T															T					T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	A	V	A	E	D	G	E	P	C	V	T	Y	I	G	A	D	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	A	E	A	Y	S	L	L	K	G	G	L	N	L	T	N	E	E	L	A	Q	T	F	T	E	W	N	N	G	E	L	S	S	Y	L	I	D	I	T	K	D	I
Query Conservation
Alig confidence						.	.	.	.	.	.	.							.																															.
Template Conservation						.	.	.	.	.	.	.							.																															.
Template Sequence		L	A	G	H	.	.	.	.	.	.	.	T	V	F	L	P	W	.	D	E	A	L	A	F	A	T	V	L	H	A	H	A	F	A	A	X	V	T	F	F	E	A	V	G	A	G	D	R	.	F	G	L	P	V	S	K	T	A	R	L	L	L	E	T	S	R	F	F	V	A	D	A	L	E	E	A	V	R	R	L
Template Known Secondary structure		T		S		.	.	.	.	.	.	.							.																															.	T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.							.																															.
Template SS confidence
		160	.	.	.								.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	K	K	D	E	D	G	N	Y	L	V	D	V	I	L	D	E	A	A	N	K	G	T	G	K	W	T	S	Q	S	A	L	D	L	G	E	P	L	S	L	I	T	E	S	V	F	A
Query Conservation
Alig confidence																					.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		E	T	Q	D	F	K	G	D	Q	A	R	L	D	V	H	A	D	A	F	.	.	.	.	.	.	A	H	I	A	Q	S	L	H	A	Q	G	V	W	T	P	V	F	D	A	V	C	Q	V
Template Known Secondary structure				T				T	T	S	S	B									.	.	.	.	.	.											T
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.							250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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