Job Description P00350 Confidence 99.74% Date Thu Jan 5 10:56:33 GMT 2012 Rank 67 Aligned Residues 222 % Identity 13% Template c3ktdC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of a putative prephenate dehydrogenase (cgl0226)2 from corynebacterium glutamicum atcc 13032 at 2.60 a resolution Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	K	Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V	K	A	G	A	G	T
Query Conservation
Alig confidence					.																																																														.	.	.	.
Template Conservation					.																																																														.	.	.	.
Template Sequence		I	S	R	.	P	V	C	I	L	G	L	G	L	I	G	G	S	L	L	R	D	L	H	A	A	N	H	S	V	F	G	Y	N	R	S	R	S	G	A	K	S	A	V	D	E	G	F	D	V	S	A	D	L	E	A	T	L	Q	R	A	A	A	E	D	A	.	.	.	.	L	I	V	L	A	V	P	X	T	A	I
Template Known Secondary structure			S	S	.								S													T	T								S	S										T	T					S												T	T		.	.	.	.						S
Template Predicted Secondary structure					.																																																														.	.	.	.
Template SS confidence
		6	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.
Predicted Secondary structure																																															.													.									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.													.									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	A	I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I	G	T	.	G	V	S	G	G	E	E	G	A	L	K	G	.	P	S	I	M	P	G	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																															.													.									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																									.	.										.													.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																									.	.
Template Sequence		D	S	L	L	D	A	V	H	T	.	H	A	P	N	N	G	F	T	D	V	V	S	V	K	T	A	V	Y	D	A	V	K	A	R	.	.	N	X	Q	H	R	Y	V	G	S	H	P	X	A	G	T	A	N	G	W	S	A	S	X	D	G	L	F	K	R	A	V	W	V	V	T	F	D	Q	L	F	D	G	T	D
Template Known Secondary structure											.			T	T								S		S										T	.	.	T		G	G	G	B						T	T						G	G	G			S	S	S	S	T	T								G	G	G	T	S	S
Template Predicted Secondary structure											.																									.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
							146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.												200	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																											.	.	.													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																											.	.	.													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	K	E	A	Y	E	L	V	A	P	I	L	T	K	I	A	A	V	A	E	D	G	E	P	C	V	T	Y	I	G	A	D	G	A	G	H	Y	V	K	M	V	H	N	.	.	.	G	I	E	Y	G	D	M	Q	L	I	A	E	.	.	.	.	.	.	.	.	.	.	.	A	Y	S	L	L	K	G
Query Conservation		.	.	.	.	.																																											.	.	.													.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																		.	.	.	.	.	.	.																			.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.
Template Sequence		I	N	S	T	W	I	S	I	W	K	D	V	V	Q	X	A	L	A	V	G	A	E	.	.	.	.	.	.	.	V	V	P	S	R	V	G	P	H	D	A	A	A	A	R	V	S	H	L	T	H	I	L	A	E	T	L	A	I	V	G	D	N	G	G	A	L	S	L	S	L	A	A	G	S	Y	R	D	S	T	R
Template Known Secondary structure																				T	T			.	.	.	.	.	.	.																	T																																	T	G
Template Predicted Secondary structure																								.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	N	L	T	N	E	E	L	A	Q	T	F	T	E	W	N	N	G	E	L	S	S	Y	L	I	D	I	T	K	D	I
Query Conservation
Alig confidence																	.
Template Conservation																	.
Template Sequence		V	A	G	T	D	P	G	L	V	R	A	X	C	E	S	.	N	A	G	P	L	V	K	A	L	D	E	A	L	A	I	L
Template Known Secondary structure		G	G	G	S											T	.	T
Template Predicted Secondary structure																	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions