Return to main results Retrieve Phyre Job Id

Job DescriptionP00350
Confidence99.81%DateThu Jan 5 10:56:33 GMT 2012
Rank53Aligned Residues279
% Identity15%Templatec3hwrA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:2-dehydropantoate 2-reductase; PDBTitle: crystal structure of pane/apba family ketopantoate reductase2 (yp_299159.1) from ralstonia eutropha jmp134 at 2.15 a resolution
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40...... ...50.........60.........70.........
Predicted Secondary structure 









.....















Query SS confidence 









































. . . . .
































Query Sequence  QIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAEN. . . . . PGKKLVPYYTVKEFVESLETPRRILLMVKAGAG
Query Conservation   






 

  

 

   
  
 



       
   
.....
      
 
  
 
  
    



 

    
Alig confidence 





























.










.....




























.


Template Conservation 

 


 
  
   
  
   
  
    
.          
                          




 
 .
  
Template Sequence  KVAIXGAGAVGCYYGGXLARAGHEVILIAR. PQHVQAIEATGLRLETQSFDEQVKVSASSDPSAVQGADLVLFCVK. STD
Template Known Secondary structure  S
STT


.

SS


S
GGGGTT
S


.GGG
Template Predicted Secondary structure 






.

















.
Template SS confidence 















































































   2.......10.........20.........30. ........40.........50.........60.........70...... ...
 
   80.........90.........100 .........110.........120.........130....... ..140.........150.......
Predicted Secondary structure 






.














.



Query SS confidence 




















.




































.



















Query Sequence  TDAAIDSLKPYLDKGDIIIDG. GNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKG. PSIMPGGQKEAYELVAPILT
Query Conservation 
  

  
   
  
 



 .

     
   
  
   

 








  

  
.







 

 
 
 


 
Alig confidence 




















.




































.



















Template Conservation      
            

    
                                          
           
 
Template Sequence  TQSAALAXKPALAKSALVLSLQNGVENADTLRSLLEQEVAAAVVYVATEXAGPGHVRHHGRGELVIEPTSHGANLAAIFA
Template Known Secondary structure  TTTS
TT

SSSS

STT


TTT
Template Predicted Secondary structure 





























Template SS confidence 















































































   80.........90.........100.........110.........120.........130.........140.........150.........
 
   158.160.........170.........180.........190.........200.........210... ......220.........230.
Predicted Secondary structure 















......



Query SS confidence 























































. . . . . .

















Query Sequence  KIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNE. . . . . . ELAQTFTEWNNGELSSYL
Query Conservation   


    
   
   
  



 





 


  

 



  

    

   ...... 

 

  

 
 
 


Alig confidence 




.......











































......

















Template Conservation       .......     
       
   
                             
  
   
             
Template Sequence  AAGVP. . . . . . . VETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVXRDVXEECFAVARAEGVKLPDDVA
Template Known Secondary structure  TT

.......
S
T

TTSTTTT



TT
Template Predicted Secondary structure 



.......












Template SS confidence 















































































   160.... .....170.........180.........190.........200.........210.........220.........230..
 
   232.......240.........250.........260.. .......270.........280.........290.......
Predicted Secondary structure 














.....






Query SS confidence 






























. . . . .


































Query Sequence  IDITKDIFTKKDEDGNYLVDVILDEAANKGT. . . . . GKWTSQSALDLGEPLSLITESVFARYISSLKDQRV
Query Conservation   


   
   
         
 
    


.....
 

   
  



 
 
  
   
  
  
  
 
Alig confidence 









....
















.....















.

















Template Conservation            ....     
   
   
   
     
    

   

  
.    
  
    
     
Template Sequence  LAIRRIAETX. . . . PRQSSSTAQDLARGKRSEIDHLNGLIVRRGDALGIPVP. ANRVLHALVRLIEDKQQH
Template Known Secondary structure  S....TT


TT


SGGGTTT


.
Template Predicted Secondary structure 


....















.

Template SS confidence 






































































   233......240.. .......250.........260.........270.........280 .........290........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions