Job Description P00350 Confidence 95.40% Date Thu Jan 5 10:56:33 GMT 2012 Rank 447 Aligned Residues 113 % Identity 16% Template c3hn7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate-l-alanine ligase; PDBTitle: crystal structure of a murein peptide ligase mpl (psyc_0032) from2 psychrobacter arcticus 273-4 at 1.65 a resolution Resolution 1.65 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure															.																				.	.
Query SS confidence															.																				.	.
Query Sequence		Q	Q	I	G	V	V	G	M	A	V	M	G	R	.	N	L	A	L	N	I	E	S	R	G	Y	T	V	S	I	F	N	R	S	.	.	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V	K	A	G	A	G	T
Query Conservation															.																				.	.
Alig confidence															.																				.	.														.	.	.	.	.
Template Conservation																																																		.	.	.	.	.
Template Sequence		X	H	I	H	I	L	G	I	C	G	T	F	X	G	S	L	A	L	L	A	R	A	L	G	H	T	V	T	G	S	D	A	N	I	Y	P	P	X	S	T	Q	L	E	Q	A	G	V	T	.	.	.	.	.	I	E	E	G	Y	L	I	A	H	L	Q	P	A	P	D	L	V	V	V	G	N	A	X	K	R	G	X
Template Known Secondary structure								T	T	T	S													T	T								S				T	T								T	T			.	.	.	.	.				S			G	G	G	G		S			S						T	T			T	T	S
Template Predicted Secondary structure																																																		.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		81	.	.	.	.	.														.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query Sequence		D	A	A	I	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	P	Y	L	D	K	G	D	.	.	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation
Template Sequence		D	V	I	E	Y	X	L	D	T	G	L	R	Y	T	S	G	P	Q	F	L	S	E	Q	V	L	Q	S	R	H	V	I	A	V	A	G	T	H	G	K	T	T	T	T	T	X	L	A	W	I	L	H	Y	A	G	I	D
Template Known Secondary structure											T														T	G	G	G	S								S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions