Job Description P00350 Confidence 99.71% Date Thu Jan 5 10:56:33 GMT 2012 Rank 70 Aligned Residues 198 % Identity 18% Template c3ggpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from a. aeolicus in2 complex with hydroxyphenyl propionate and nad+ Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		M	S	K	Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	.	.	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V	K	A	G	A
Query Conservation																													.	.
Alig confidence																													.	.																					.	.	.	.																									.
Template Conservation																																																			.	.	.	.																									.
Template Sequence		L	S	M	Q	N	V	L	I	V	G	V	G	F	M	G	G	S	F	A	K	S	L	R	R	S	G	F	K	G	K	I	Y	G	Y	D	I	N	P	E	S	I	S	K	A	V	D	L	G	I	.	.	.	.	I	D	E	G	T	T	S	I	A	K	V	E	D	F	S	P	D	F	V	M	L	S	S	P	.	V	R
Template Known Secondary structure											S		S													T	T			S							S											T	T	S	.	.	.	.		S				S		T	G	G	G	G	G	G			S						S		.	G	G
Template Predicted Secondary structure																																																			.	.	.	.																									.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.		.	.	140	.	.	.	.				.	.	.	.
Predicted Secondary structure																																										.	.																		.	.	.	.			.								.	.	.
Query SS confidence																																										.	.																		.	.	.	.			.								.	.	.
Query Sequence		G	T	D	A	A	I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	.	.	G	F	N	F	I	G	T	G	V	S	G	G	E	E	G	A	L	.	.	.	.	K	G	.	P	S	I	M	P	G	G	.	.	.	Q	K	E	A
Query Conservation																																										.	.																		.	.	.	.			.								.	.	.
Alig confidence																																										.	.																		.	.	.	.			.								.	.	.
Template Conservation
Template Sequence		T	F	R	E	I	A	K	K	L	S	Y	I	L	S	E	D	A	T	V	T	D	Q	G	S	V	K	G	K	L	V	Y	D	L	E	N	I	L	G	K	R	F	V	G	G	H	P	I	A	G	T	E	K	S	G	V	E	Y	S	L	D	N	L	Y	E	G	K	K	V	I	L	T	P	T	K	K	T	D	K	K	R
Template Known Secondary structure		G												S		T	T								S			T											G	G	G											S			S	G	G	G			S	S	T	T	T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	L	V	A	P	I	L	T	K	I	A	A	V	A	E	D	G	E	P	C	V	T	Y	I	G	A	D	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	A	E	A	Y	S	L	L	K	G	G	L	N	L	T	N	E	E	L
Query Conservation
Alig confidence																.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.														.	.	.	.	.
Template Sequence		L	K	L	V	K	R	V	W	E	D	V	G	G	V	.	.	.	.	.	.	.	V	E	Y	M	S	P	E	L	H	D	Y	V	F	.	.	.	.	.	G	V	V	S	H	L	P	H	A	V	A	F	A	L	V	D	T	L	I	H	M	S	T	P	E	V	D	L
Template Known Secondary structure												T	T			.	.	.	.	.	.	.														.	.	.	.	.				T																				S	S			G
Template Predicted Secondary structure																.	.	.	.	.	.	.														.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.								.	.	.	200	.	.	.	.	.	.	.	.	.						210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions