Job Description P00350 Confidence 97.98% Date Thu Jan 5 10:56:33 GMT 2012 Rank 245 Aligned Residues 113 % Identity 15% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	.	L	E	T	P	R	R	I	L	L	M	V	K	A	G	A	G	T	D	A	A
Query Conservation																																																													.
Alig confidence																																																													.
Template Conservation
Template Sequence		H	A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	I	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	X	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	Y	E	A	G	E	I
Template Known Secondary structure									S													T	T								S											T	T						S		T	T	S							T	T	G	G	G		S							S
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I
Query Conservation
Alig confidence																				.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	A	H	.	.	.	.	.	.	Y	D	D	E	V	A	Y	I	T	E	R	G	A	N	Q	V
Template Known Secondary structure										S	S	S							S	.	.	.	.	.	.	S										T	T		S
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.							.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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