Job Description P00350 Confidence 98.30% Date Thu Jan 5 10:56:33 GMT 2012 Rank 207 Aligned Residues 122 % Identity 19% Template c3dapB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:diaminopimelic acid dehydrogenase; PDBTitle: c. glutamicum dap dehydrogenase in complex with nadp+ and2 the inhibitor 5s-isoxazoline Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.							.
Query SS confidence																											.							.
Query Sequence		M	S	K	Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	.	G	Y	T	V	S	I	.	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V	K	A	G	A
Query Conservation																											.							.
Alig confidence																											.							.												.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.
Template Sequence		M	T	N	I	R	V	A	I	V	G	Y	G	N	L	G	R	S	V	E	K	L	I	A	K	Q	P	D	M	D	L	V	G	I	F	S	R	R	A	T	L	D	T	K	T	.	.	.	.	.	.	.	.	.	.	P	V	F	D	V	A	D	V	D	K	H	A	D	D	V	D	V	L	F	L	C	M	G	S	A	T
Template Known Secondary structure													S											T	T		S	S									S		S			S	S	S	S	.	.	.	.	.	.	.	.	.	.					G	G	G	G	G	G	G	T	T	T		S						S		T	T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.											.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.																					.
Query SS confidence																							.	.	.																					.
Query Sequence		G	T	D	A	A	I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	.	.	.	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	.	F	N	F	I	G	T	G	V	S	G	G	E	E	G	A	L	K
Query Conservation																							.	.	.																					.
Alig confidence			.	.	.	.																	.	.	.																					.
Template Conservation			.	.	.	.
Template Sequence		D	.	.	.	.	I	P	E	Q	A	P	K	F	A	Q	F	A	C	T	V	D	T	Y	D	N	H	R	D	I	P	R	H	R	Q	V	M	N	E	A	A	T	A	A	G	N	V	A	L	V	S	T	G	W	D	P	G	M	F	S	I	N	R
Template Known Secondary structure			.	.	.	.									T	T	T	S									G	G	G																T						S		S	B	T	T	B
Template Predicted Secondary structure			.	.	.	.
Template SS confidence
		71					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions