Job Description P00350 Confidence 97.60% Date Thu Jan 5 10:56:33 GMT 2012 Rank 278 Aligned Residues 110 % Identity 15% Template c2v65A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase a chain; PDBTitle: apo ldh from the psychrophile c. gunnari Resolution 2.35 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																													.	.														.	.	.	.
Query SS confidence																													.	.														.	.	.	.
Query Sequence		M	S	K	Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	.	.	T	V	S	I	F	N	R	S	R	E	K	T	E	.	.	.	.	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V
Query Conservation																													.	.														.	.	.	.
Alig confidence																													.	.														.	.	.	.																			.	.
Template Conservation																																																																		.	.
Template Sequence		G	S	R	S	K	V	T	V	V	G	V	G	M	V	G	M	A	S	A	I	S	I	L	L	K	D	L	C	D	E	L	A	M	V	D	V	M	E	D	K	L	K	G	E	V	M	D	L	Q	H	G	S	L	F	L	K	T	K	I	V	G	D	K	D	.	.	Y	S	V	T	A	N	S	K	V	V	V	V	T	A
Template Known Secondary structure				S	S								S													T	T			S							S														T	T	G	G	G			S						S	S	.	.	G	G	G	G	T	T		S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.			.	.	.	.	.	.	.	.	90	.	.	.	.	.
		75	.	.												.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	G	.	.	.	.	.	.	.	.	.	.	.	A	G	T	D	A	A	I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R
Query Conservation					.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																														.
Template Sequence		G	A	G	E	S	R	L	N	L	V	Q	R	N	V	N	I	F	K	F	I	I	P	N	I	V	K	Y	S	.	P	N	C	I	L	M	V	V	S	N	P	V	D	I	L	T	Y	V	A	W	K
Template Known Secondary structure																														.	T	T							S	S	S
Template Predicted Secondary structure																														.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions