Job Description P00350 Confidence 99.79% Date Thu Jan 5 10:56:33 GMT 2012 Rank 57 Aligned Residues 185 % Identity 11% Template c2rafC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:putative dinucleotide-binding oxidoreductase; PDBTitle: crystal structure of putative dinucleotide-binding2 oxidoreductase (np_786167.1) from lactobacillus plantarum3 at 1.60 a resolution Resolution 1.60 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V	K	A	G	A	G	T	D	A	A
Query Conservation
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.
Template Sequence		X	E	I	T	I	F	G	K	G	N	X	G	Q	A	I	G	H	N	F	E	I	A	G	H	E	V	T	Y	Y	G	S	K	D	Q	A	T	T	L	G	E	I	V	I	X	A	V	P	Y	P	A	L	A	A	L	A	K	.	.	.	.	.	.	.	.	.	.	Q	Y	A	T	Q	L	K	G	K	I	V	V	D	I
Template Known Secondary structure										S												T	T	T								T	T					S			S						S											.	.	.	.	.	.	.	.	.	.		T					T	T	S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.											.	.	.	60	.	.	.	.	.	.	.	.	.	70
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																								.						.
Query SS confidence																																																								.						.
Query Sequence		I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I	G	T	G	V	S	G	G	E	E	G	A	L	K	G	.	P	S	I	M	P	.	G	G	Q	K	E	A	Y	E	L	V	A	P	I	L	T	K	I	A	A
Query Conservation																																																								.						.
Alig confidence																																																								.						.
Template Conservation
Template Sequence		T	N	P	L	N	F	D	T	W	D	D	L	V	V	P	A	D	S	S	A	A	Q	E	L	Q	Q	Q	L	P	D	S	Q	V	L	K	A	F	N	T	T	F	A	A	T	L	Q	S	G	Q	V	N	G	K	E	P	T	T	V	L	V	A	G	N	D	D	S	A	K	Q	R	F	T	R	A	L	A	D	S	P	L
Template Known Secondary structure					B		T	T	T	S	S		B	S	S		T	T												T	T	S						S	T	T	S								S			T	T	T										S												T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		V	A	E	D	G	E	P	C	V	T	Y	I	G	A	D	G	A	G	H	Y	V	K	.	.	.	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	A	E	A	Y	S	L	L	K
Query Conservation																								.	.	.
Alig confidence			.	.	.	.	.	.	.															.	.	.
Template Conservation			.	.	.	.	.	.	.
Template Sequence		E	.	.	.	.	.	.	.	V	K	D	A	G	K	L	K	R	A	R	E	L	E	A	X	G	F	X	Q	X	T	L	A	A	S	E	Q	I	G	W	T	G	G	F	A	V	V	K
Template Known Secondary structure			.	.	.	.	.	.	.						S	G	G	G																	T	T	S	S		T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.
Template SS confidence
		151								.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions