Job Description P00350 Confidence 98.97% Date Thu Jan 5 10:56:33 GMT 2012 Rank 107 Aligned Residues 246 % Identity 18% Template c2qytA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:2-dehydropantoate 2-reductase; PDBTitle: crystal structure of 2-dehydropantoate 2-reductase from porphyromonas2 gingivalis w83 Resolution 2.15 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.							.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.												.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	.	.	.	.	.	.	Y	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	.	.	.	.	.	.	.	.	.	.	.	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L
Query Conservation																											.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.									.														.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation																																									.																																					.	.	.	.
Template Sequence		Q	P	I	K	I	A	V	F	G	L	G	G	V	G	G	Y	Y	G	A	X	L	A	L	R	A	A	A	T	D	G	L	L	E	V	S	W	I	A	R	.	G	A	H	L	E	A	I	R	A	A	G	G	L	R	V	V	T	P	S	R	D	F	L	A	R	P	T	C	V	T	D	N	P	A	E	V	.	.	.	.
Template Known Secondary structure												S																	T	T	S	S									.											T	S						S	S								S				S						.	.	.	.
Template Predicted Secondary structure																																									.																																					.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140
Predicted Secondary structure																																																							.	.	.																					.
Query SS confidence																																																							.	.	.																					.
Query Sequence		E	T	P	R	R	I	L	L	M	V	K	A	G	A	G	T	D	A	A	I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	.	.	.	E	G	F	N	F	I	G	T	G	V	S	G	G	E	E	G	A	L	K	G	.	P	S	I
Query Conservation																																																							.	.	.																					.
Alig confidence															.																																								.	.	.																					.
Template Conservation															.
Template Sequence		G	T	V	D	Y	I	L	F	C	T	K	D	Y	.	D	X	E	R	G	V	A	E	I	R	P	X	I	G	Q	N	T	K	I	L	P	L	L	N	G	A	D	I	A	E	R	X	R	T	Y	L	P	D	T	V	V	W	K	G	C	V	Y	I	S	A	R	K	S	A	P	G	L	I	T	L	E	A	D	R	E	L
Template Known Secondary structure												S	S	S	.										G	G	G											S		S	S	S						T	T	T	S		T	T	T	B														T	T
Template Predicted Secondary structure															.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		141	.						.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.									.	200	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.																																																									.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.																																																									.	.	.	.	.	.	.	.
Query Sequence		M	P	.	.	.	.	.	G	G	Q	K	E	A	Y	E	L	V	A	P	I	L	T	K	I	A	A	V	A	E	D	G	E	P	C	V	T	Y	I	G	A	D	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	A	.	.	.	.	.	.	.	.	E	A	Y	S	L	L	K	G	G
Query Conservation				.	.	.	.	.																																																									.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.																					.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.
Template Sequence		F	Y	F	G	S	G	L	P	E	Q	T	D	D	E	V	R	L	A	E	L	L	T	A	A	G	I	R	.	.	.	.	.	.	.	A	Y	N	P	T	D	I	D	W	Y	I	X	K	K	F	X	X	I	S	V	T	A	T	A	T	A	Y	F	D	K	P	I	G	S	I	L	T	E	H	E	P	E	L	L	S	L
Template Known Secondary structure								S	S	S															T	T			.	.	.	.	.	.	.					S																								T	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.								.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	L	T	N	E	E	L	A	Q	T	F	T	E	W	N	N	G	E	L	S	S	Y	L	I	D	I	T	K	D	I	F	T	K	K	D	E	D	G	N	Y	L	V	D	V	I	L	D	E	A	A	N	K	G	T	G	K	W	T	S	Q	S	A	L	D	L	G	E	P	L	S	L	I	T	E
Query Conservation
Alig confidence			.	.	.	.										.																				.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.										.																				.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Template Sequence		L	.	.	.	.	E	E	V	A	E	L	F	R	A	.	K	Y	G	Q	V	P	D	D	V	V	Q	Q	L	L	D	K	Q	R	K	.	.	.	.	.	.	.	.	X	E	T	L	T	G	Y	.	.	.	.	.	.	.	.	.	V	V	R	E	A	E	A	L	R	V	D	L	P	X	Y	K	R
Template Known Secondary structure			.	.	.	.										.		T	S				S	S												.	.	.	.	.	.	.	.			T	T	T			.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure			.	.	.	.										.																				.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Template SS confidence
		231					.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.									260	.	.	.	.	.	.										.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions