Job Description P00350 Confidence 99.93% Date Thu Jan 5 10:56:33 GMT 2012 Rank 32 Aligned Residues 216 % Identity 15% Template c2q3eH_ PDB info PDB header:oxidoreductase Chain: H: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of human udp-glucose dehydrogenase complexed with nadh and2 udp-glucose Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	K	Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	.	.	Y	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S
Query Conservation																												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	E	I	K	K	I	C	C	I	G	A	G	Y	V	G	G	P	T	C	S	V	I	A	H	M	C	P	E	I	R	V	T	V	V	D	V	N	E	S	R	I	N	A	W	N	S	P	T	L	P	I	Y	E	P	G	L	K	E	V	V	E	S	C	R	G	K	N	L	F	F	S	T	N	I	D	D	A	I	K	E
Template Known Secondary structure													S	T	T													T	T	S							S									T	S	S	S		S	S			T	T									B	T	T	T					S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.															.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	T	P	R	R	I	L	L	M	V	K	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	T	D	A	A	I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I	G	T	G	V	S	G
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.
Template Sequence		A	D	.	.	.	L	V	F	I	S	V	N	T	P	T	K	T	Y	G	M	G	K	G	R	A	A	D	L	K	Y	I	E	A	C	A	R	R	I	V	Q	N	S	N	G	Y	K	I	V	T	E	K	S	T	V	P	V	R	A	A	E	S	I	R	R	I	F	D	A	N	T	K	P	N	L	N	L	Q	V	L	S
Template Known Secondary structure			S	.	.	.										B		S	S	S	T	T	T	T	T	S	B																		S								S				T	T											T	T			T	T
Template Predicted Secondary structure				.	.	.
Template SS confidence
		82	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.		.	.									140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure										.			.	.	.	.	.	.	.	.							.	.	.	.	.
Query SS confidence										.			.	.	.	.	.	.	.	.							.	.	.	.	.
Query Sequence		G	E	E	G	A	L	K	G	.	P	S	.	.	.	.	.	.	.	.	I	M	P	G	G	Q	.	.	.	.	.	K	E	A	Y	E	L	V	A	P	I	L	T	K	I	A	A	V	A	E	D	G	E	P	C	V	T	Y	I	G	A	D	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q
Query Conservation										.			.	.	.	.	.	.	.	.							.	.	.	.	.
Alig confidence										.			.	.	.	.	.	.	.	.							.	.	.	.	.																			.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.
Template Sequence		N	P	E	F	L	A	E	G	T	A	I	K	D	L	K	N	P	D	R	V	L	I	G	G	D	E	T	P	E	G	Q	R	A	V	Q	A	L	C	A	V	Y	E	H	W	V	P	R	E	.	.	.	.	.	.	K	I	L	T	T	N	T	W	S	S	E	L	S	K	L	A	A	N	A	F	L	A	Q	R	I	S
Template Known Secondary structure								T	T	S							S		S								S	S															T	T	T	S		G	G	.	.	.	.	.	.	G
Template Predicted Secondary structure																																																		.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.							.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		L	I	A	E	A	Y	S	L	L	K	G	G	L	N	L	T	N	E	E	L	A	Q	T	F	T	E	.	W	N	N	G	E
Query Conservation																												.
Alig confidence											.																	.
Template Conservation											.
Template Sequence		S	I	N	S	I	S	A	L	C	.	E	A	T	G	A	D	V	E	E	V	A	T	A	I	G	M	D	Q	R	I	G	N
Template Known Secondary structure											.				T												T	S	T	T	T		S
Template Predicted Secondary structure											.
Template SS confidence
		233	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions